Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: TRAF-type

Term: IPR013322  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene27081 SustainPine v2.0 1739
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
Complete
sp_v2.0_unigene28241 SustainPine v2.0 1058
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase family protein 2.8026e-45
C-terminus
sp_v2.0_unigene29063 SustainPine v2.0 628
AutoFact: MATH domain-containing protein [Arabidopsis thaliana] gb|AEE27680.1| MATH domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=MATH domain-containing protein At5g43560; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: math domain-containing protein at5g43560-like 0.0
Internal
sp_v2.0_unigene29835 SustainPine v2.0 1913
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
Complete
sp_v2.0_unigene30967 SustainPine v2.0 1488
AutoFact: SINA [Phyllostachys praecox] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
Putative Complete
sp_v2.0_unigene33426 SustainPine v2.0 1007
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cgs1 mrna stability 0.0
C-terminus
sp_v2.0_unigene35744 SustainPine v2.0 369
AutoFact: SKP1 interacting partner 5 [Arabidopsis thaliana] 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein skip5 0.0
Internal
sp_v2.0_unigene39112 SustainPine v2.0 517
AutoFact: MATH domain containing protein 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene40076 SustainPine v2.0 668
AutoFact: Ubiquitin specific protease 12 n=1 Tax=Nicotiana tabacum RepID=B6V765_TOBAC 0.0
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
Internal
sp_v2.0_unigene42804 SustainPine v2.0 556
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12 0.0
Putative Complete
sp_v2.0_unigene45790 SustainPine v2.0 291
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: traf-like protein 6.22495e-14
Internal
sp_v2.0_unigene47818 SustainPine v2.0 676
AutoFact: TRAF-like protein [Arabidopsis thaliana] dbj|BAF03523.1| CGS1 mRNA stability 1 [Arabidopsis thaliana] gb|AEC07688.1| TRAF-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cgs1 mrna stability 0.0
Internal
sp_v2.0_unigene55160 SustainPine v2.0 405
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cgs1 mrna stability 1.6443e-24
Internal
sp_v2.0_unigene57363 SustainPine v2.0 462
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cgs1 mrna stability 0.0
Internal
sp_v2.0_unigene57794 SustainPine v2.0 492
AutoFact: TRAF-like protein [Arabidopsis thaliana] dbj|BAF03523.1| CGS1 mRNA stability 1 [Arabidopsis thaliana] gb|AEC07688.1| TRAF-like protein [Arabidopsis thaliana] 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: traf-like protein 0.0
Putative Complete
sp_v2.0_unigene60154 SustainPine v2.0 957
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz protein 0.0
N-terminus
sp_v2.0_unigene62560 SustainPine v2.0 726
AutoFact: PREDICTED: SINA2p isoform 2 [Vitis vinifera] ref|XP_002280243.1| PREDICTED: SINA2p isoform 1 [Vitis vinifera] emb|CAB40578.1| SINA2p [Vitis vinifera] emb|CBI29998.3| unnamed protein product [Vitis vinifera] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sinat2 0.0
N-terminus
sp_v2.0_unigene64050 SustainPine v2.0 447
AutoFact: BTB/POZ and MATH domain-containing protein 2 n=2 Tax=Arabidopsis RepID=BPM2_ARATH 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz 7.93972e-22
Putative C-terminus
sp_v2.0_unigene64788 SustainPine v2.0 449
AutoFact: BTB-POZ and MATH domain protein n=1 Tax=Capsicum annuum RepID=B9VXZ7_CAPAN 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz 4.25297e-13
C-terminus
sp_v2.0_unigene64794 SustainPine v2.0 699
AutoFact: putative mitochondrial aldehyde dehydrogenase [Populus x canadensis] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aldehyde dehydrogenase 2.6135e-37
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain