Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6686 SustainPine v2.0 636
AutoFact: Late embryogenesis abundant protein n=2 Tax=Picea RepID=Q40861_PICGL 1.0e-26
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: late embryogenesis abundant protein 3.22966e-32
C-terminus
sp_v2.0_unigene6784 SustainPine v2.0 512
AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Callose synthase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 5 0.0
Internal
sp_v2.0_unigene6859 SustainPine v2.0 906
AutoFact: kelch repeat-containing F-box-like [Oryza sativa Japonica Group] dbj|BAD25009.1| kelch repeat-containing F-box-like [Oryza sativa Japonica Group] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box kelch-repeat protein 0.0
C-terminus
sp_v2.0_unigene6867 SustainPine v2.0 1970
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 0.0
C-terminus
sp_v2.0_unigene6969 SustainPine v2.0 1166
AutoFact: Unassigned protein
FL-Next: sp=F-box/LRR-repeat protein 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box lrr-repeat protein 14 0.0
C-terminus
sp_v2.0_unigene7060 SustainPine v2.0 1659
AutoFact: O-fucosyltransferase-like protein [Arabidopsis thaliana] gb|AAK25969.1|AF360259_1 putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAN71964.1| putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AEC09474.1| O-fuc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene7069 SustainPine v2.0 689
AutoFact: ATP-dependent DNA helicase Q-like 3 n=2 Tax=Arabidopsis thaliana RepID=RQL3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase q-like 3 0.0
Internal
sp_v2.0_unigene7355 SustainPine v2.0 2789
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
N-terminus
sp_v2.0_unigene7421 SustainPine v2.0 768
AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter-like protein 0.0
C-terminus
sp_v2.0_unigene7452 SustainPine v2.0 2200
AutoFact: GCN5-related N-acetyltransferase; BRCT [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: mediator of dna damage checkpoint protein 0.0
Complete
sp_v2.0_unigene7702 SustainPine v2.0 1326
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q8RWD6.1|FB271_ARATH RecName: Full=F-box protein At5g39450 gb|AAM13163.1| unknown protein [Arabidopsis thaliana] gb|AAP68350.1| At5g39450 [Arabidopsis thaliana] gb|AED94434.1| F-box protein [Arabidopsis thaliana] 0.0
FL-Next: sp=F-box protein At5g39450; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at5g39450-like 0.0
C-terminus
sp_v2.0_unigene7846 SustainPine v2.0 1696
AutoFact: WS01041.B21.1_K07 SS-R-N-A-11 Picea sitchensis cDNA clone WS01041_K07 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein chloroplastic-like 1.67487e-40
C-terminus
sp_v2.0_unigene7863 SustainPine v2.0 3573
AutoFact: Callose synthase n=1 Tax=Arabidopsis thaliana RepID=F4JDA3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: callose synthase 10 0.0
Complete
sp_v2.0_unigene7988 SustainPine v2.0 1067
AutoFact: ABC transporter B family member 28 n=4 Tax=Arabidopsis thaliana RepID=AB28B_ARATH 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 28 0.0
C-terminus
sp_v2.0_unigene8064 SustainPine v2.0 1371
AutoFact: copine-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg1-like 0.0
C-terminus
sp_v2.0_unigene8207 SustainPine v2.0 523
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RBJ7_SELML 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: atp-binding cassette transporter 0.0
C-terminus
sp_v2.0_unigene8270 SustainPine v2.0 1732
AutoFact: F-box domain containing protein n=2 Tax=Zea mays RepID=B6TRX2_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein skip31 0.0
Complete
sp_v2.0_unigene8282 SustainPine v2.0 1465
AutoFact: F-box family protein-like [Oryza sativa Japonica Group] gb|EAZ38244.1| hypothetical protein OsJ_22620 [Oryza sativa Japonica Group] dbj|BAG87089.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein skip31 0.0
Complete
sp_v2.0_unigene8324 SustainPine v2.0 2230
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q84WW1.1|FB140_ARATH RecName: Full=F-box protein At3g12350 gb|AAN71924.1| putative F-box protein family [Arabidopsis thaliana] gb|AEE75186.1| F-box protein [Arabidopsis thaliana] 4.0e-39
FL-Next: sp=F-box protein At3g12350; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g12350-like 0.0
Complete
sp_v2.0_unigene8388 SustainPine v2.0 2132
AutoFact: F-box protein SKIP17 [Arabidopsis thaliana] sp|Q0WRC9.1|SKI17_ARATH RecName: Full=F-box protein SKIP17; AltName: Full=SKP1-interacting partner 17 dbj|BAF00320.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82223.1| F-box protein SKIP17 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain