Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote

Term: IPR015940  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene58762 SustainPine v2.0 261
AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO 1.0e-15
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 1.5064e-18
Internal
sp_v2.0_unigene59449 SustainPine v2.0 1305
AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase dhx16 0.0
Internal
sp_v2.0_unigene59481 SustainPine v2.0 476
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 1.0e-30
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 9.62732e-35
Internal
sp_v2.0_unigene59588 SustainPine v2.0 385
AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 0.0
FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna helicase q-like sim-like 0.0
Internal
sp_v2.0_unigene59974 SustainPine v2.0 615
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable atp-dependent rna helicase ythdc2-like 0.0
Putative N-terminus
sp_v2.0_unigene60791 SustainPine v2.0 524
AutoFact: Ubiquitin carrier protein n=13 Tax=Tracheophyta RepID=Q69JN7_ORYSJ 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme-like protein 0.0
Putative Complete
sp_v2.0_unigene61053 SustainPine v2.0 1300
AutoFact: SUMO-conjugating enzyme UBC9 n=2 Tax=Arabidopsis thaliana RepID=F4JKF3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene61310 SustainPine v2.0 526
AutoFact: Ubiquitin carrier protein n=1 Tax=Ricinus communis RepID=B9SLF2_RICCO 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme 0.0
Complete
sp_v2.0_unigene61402 SustainPine v2.0 953
AutoFact: Ubiquitin-conjugating enzyme E2 35 n=42 Tax=Embryophyta RepID=UBC35_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 36 0.0
Putative Complete
sp_v2.0_unigene61926 SustainPine v2.0 518
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 4.0e-34
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Blast2go: uv excision repair protein 1.61455e-40
N-terminus
sp_v2.0_unigene62547 SustainPine v2.0 819
AutoFact: Ser/Thr protein kinase n=2 Tax=fabids RepID=Q53VM4_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf1-related protein kinase catalytic subunit alpha kin10 0.0
Putative N-terminus
sp_v2.0_unigene62786 SustainPine v2.0 521
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 1.0e-33
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Blast2go: uv excision repair protein 6.50408e-40
N-terminus
sp_v2.0_unigene62829 SustainPine v2.0 320
AutoFact: Ubiquitin-protein ligase, UPL1 n=2 Tax=Selaginella moellendorffii RepID=D8T159_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
Internal
sp_v2.0_unigene63557 SustainPine v2.0 1291
AutoFact: Osmotic stress-activated protein kinase n=1 Tax=Nicotiana tabacum RepID=Q8RXH5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein kinase 0.0
N-terminus
sp_v2.0_unigene64125 SustainPine v2.0 456
AutoFact: ubiquitin-associated (UBA) zinc-finger and PB1 domain-containing protein [Arabidopsis thaliana] emb|CAA22994.1| putative protein [Arabidopsis thaliana] emb|CAB79379.1| putative protein [Arabidopsis thaliana] gb|AAL32905.1| putative protein [Arabidopsis th 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.10841e-34
C-terminus
sp_v2.0_unigene65161 SustainPine v2.0 608
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Blast2go: dna repair protein rad23-3 0.0
C-terminus
sp_v2.0_unigene66603 SustainPine v2.0 269
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-37
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna helicase a-like protein 9.80909e-45
Internal
sp_v2.0_unigene66639 SustainPine v2.0 185
AutoFact: ubiquitin-protein ligase 2 [Arabidopsis thaliana] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein upl1 3.38374e-30
Internal
sp_v2.0_unigene67615 SustainPine v2.0 280
AutoFact: putative Werner helicase-interacting protein [Arabidopsis thaliana] 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase wrnip1-like 4.2039e-45
Internal
sp_v2.0_unigene67653 SustainPine v2.0 275
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 2.0e-09
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl1-like 7.81184e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain