Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Ubiquitin-associated/translation elongation factor EF1B, N-terminal

Term: IPR000449  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene298 SustainPine v2.0 1941
AutoFact: rhomboid-like protein 15 [Arabidopsis thaliana] sp|Q8LB17.2|Y3846_ARATH RecName: Full=Uncharacterized protein At3g58460 gb|AAM97052.1| putative protein [Arabidopsis thaliana] gb|AAN15505.1| putative protein [Arabidopsis thaliana] gb|AEE79784.1| rhomboid-l 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rhomboid family protein 0.0
Complete
sp_v2.0_unigene308 SustainPine v2.0 1904
AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
Internal
sp_v2.0_unigene401 SustainPine v2.0 1981
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Putative Complete
sp_v2.0_unigene905 SustainPine v2.0 2607
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene1141 SustainPine v2.0 1577
AutoFact: Tryptophan/tyrosine permease [Arabidopsis thaliana] gb|AAV84485.1| At5g19500 [Arabidopsis thaliana] gb|AAW30037.1| At5g19500 [Arabidopsis thaliana] gb|AED92718.1| Tryptophan/tyrosine permease [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: tyrosine-specific transport 0.0
Putative Complete
sp_v2.0_unigene1687 SustainPine v2.0 1494
AutoFact: vacuolar protein sorting-associated protein 36 [Arabidopsis thaliana] sp|Q9FF81.1|VPS36_ARATH RecName: Full=Vacuolar protein sorting-associated protein 36; Short=AtVPS36; AltName: Full=ESCRT-II complex subunit VPS36 dbj|BAB11514.1| unnamed protein product 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 36; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vacuolar protein sorting-associated protein 36-like 0.0
Putative C-terminus
sp_v2.0_unigene1787 SustainPine v2.0 1549
AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl1-like 0.0
Internal
sp_v2.0_unigene3257 SustainPine v2.0 1363
AutoFact: elongation factor Ts family protein [Arabidopsis thaliana] emb|CAB43920.1| putative protein [Arabidopsis thaliana] emb|CAB79664.1| putative protein [Arabidopsis thaliana] gb|AAL10483.1| AT4g29060/F19B15_90 [Arabidopsis thaliana] gb|AEE85580.1| elongation 0.0
FL-Next: sp=Elongation factor Ts, chloroplastic; Rhodomonas salina (Cryptomonas salina). Plastid; Chloroplast. 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene3744 SustainPine v2.0 1856
AutoFact: chloroplast polyprotein of elongation factor Ts precursor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene3936 SustainPine v2.0 1083
AutoFact: DNA methyltransferase [Nicotiana tabacum] 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna (cytosine-5)-methyltransferase drm2 0.0
Internal
sp_v2.0_unigene4944 SustainPine v2.0 690
AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 7.00005e-41
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl1-like 0.0
Internal
sp_v2.0_unigene5014 SustainPine v2.0 473
AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9SN70_RICCO 1.99993e-41
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase 0.0
Internal
sp_v2.0_unigene5820 SustainPine v2.0 1316
AutoFact: putative Werner helicase-interacting protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase wrnip1-like 0.0
C-terminus
sp_v2.0_unigene6728 SustainPine v2.0 2460
AutoFact: SNF1-related protein kinase [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf1-related protein kinase catalytic subunit alpha kin10 0.0
Complete
sp_v2.0_unigene6932 SustainPine v2.0 3140
AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CSV0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 0.0
Complete
sp_v2.0_unigene7069 SustainPine v2.0 689
AutoFact: ATP-dependent DNA helicase Q-like 3 n=2 Tax=Arabidopsis thaliana RepID=RQL3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase q-like 3 0.0
Internal
sp_v2.0_unigene7086 SustainPine v2.0 1565
AutoFact: UBA-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-associated protein 0.0
Complete
sp_v2.0_unigene9881 SustainPine v2.0 3801
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
Putative Complete
sp_v2.0_unigene9898 SustainPine v2.0 2210
AutoFact: DNA damage-inducible protein 1 [Arabidopsis thaliana] ref|NP_001189877.1| DNA damage-inducible protein 1 [Arabidopsis thaliana] gb|ABG25069.1| At3g13235 [Arabidopsis thaliana] dbj|BAE98897.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75323.1| DNA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna damage-inducible protein 1 0.0
Complete
sp_v2.0_unigene10385 SustainPine v2.0 1637
AutoFact: Elongation factor Ts (Fragment) n=1 Tax=Vitis vinifera RepID=D7TC42_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation elongation factor ts 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain