Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ubiquitin-associated/translation elongation factor EF1B, N-terminal

Term: IPR000449  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene38500 SustainPine v2.0 520
AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
sp_v2.0_unigene39344 SustainPine v2.0 548
AutoFact: [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aaa atpase central domain protein 0.0
Internal
sp_v2.0_unigene39611 SustainPine v2.0 434
AutoFact: pentatricopeptide repeat-containing protein [Raphanus sativus] 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.7368e-39
Internal
sp_v2.0_unigene40522 SustainPine v2.0 505
AutoFact: SEC-C motif-containing protein / OTU-like cysteine protease family protein [Arabidopsis thaliana] gb|AED98309.1| SEC-C motif-containing protein / OTU-like cysteine protease family protein [Arabidopsis thaliana] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sec-c motif-containing protein otu-like cysteine protease family protein 2.17304e-35
N-terminus
sp_v2.0_unigene41477 SustainPine v2.0 437
AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 3.0e-21
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 2.93342e-39
Internal
sp_v2.0_unigene41686 SustainPine v2.0 294
AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO 6.0e-12
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 1.03393e-14
Internal
sp_v2.0_unigene43078 SustainPine v2.0 299
AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAY34175.1| At2g12550 [Arabidopsis thaliana] gb|AEC06204.1| ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ubiquitin-associated ts-n domain-containing protein 4.42425e-24
Internal
sp_v2.0_unigene48446 SustainPine v2.0 667
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
N-terminus
sp_v2.0_unigene48541 SustainPine v2.0 444
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase domain-containing protein 0.0
Internal
sp_v2.0_unigene48998 SustainPine v2.0 258
AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO 1.0e-13
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 2.7721e-16
Internal
sp_v2.0_unigene53837 SustainPine v2.0 466
AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dea(d h)-box rna helicase family protein 0.0
Internal
sp_v2.0_unigene58762 SustainPine v2.0 261
AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO 1.0e-15
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 1.5064e-18
Internal
sp_v2.0_unigene59481 SustainPine v2.0 476
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 1.0e-30
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 9.62732e-35
Internal
sp_v2.0_unigene59588 SustainPine v2.0 385
AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 0.0
FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna helicase q-like sim-like 0.0
Internal
sp_v2.0_unigene59974 SustainPine v2.0 615
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable atp-dependent rna helicase ythdc2-like 0.0
Putative N-terminus
sp_v2.0_unigene60791 SustainPine v2.0 524
AutoFact: Ubiquitin carrier protein n=13 Tax=Tracheophyta RepID=Q69JN7_ORYSJ 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme-like protein 0.0
Putative Complete
sp_v2.0_unigene61053 SustainPine v2.0 1300
AutoFact: SUMO-conjugating enzyme UBC9 n=2 Tax=Arabidopsis thaliana RepID=F4JKF3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene61310 SustainPine v2.0 526
AutoFact: Ubiquitin carrier protein n=1 Tax=Ricinus communis RepID=B9SLF2_RICCO 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme 0.0
Complete
sp_v2.0_unigene61402 SustainPine v2.0 953
AutoFact: Ubiquitin-conjugating enzyme E2 35 n=42 Tax=Embryophyta RepID=UBC35_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 36 0.0
Putative Complete
sp_v2.0_unigene61926 SustainPine v2.0 518
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 4.0e-34
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Blast2go: uv excision repair protein 1.61455e-40
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain