Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ubiquitin-associated/translation elongation factor EF1B, N-terminal

Term: IPR000449  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene18801 SustainPine v2.0 746
AutoFact: Ubiquitin carboxyl-terminal hydrolase 14 n=2 Tax=Arabidopsis RepID=UBP14_ARATH 9.0e-39
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-specific protease 14 0.0
N-terminus
sp_v2.0_unigene18916 SustainPine v2.0 1918
AutoFact: Serine/threonine-protein kinase SRK2E n=6 Tax=rosids RepID=SRK2E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase-like protein 0.0
Complete
sp_v2.0_unigene19420 SustainPine v2.0 1148
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5A9I6_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme 0.0
Complete
sp_v2.0_unigene19605 SustainPine v2.0 1377
AutoFact: protein kinase-like protein [Arabidopsis thaliana] emb|CAB80112.1| protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene21458 SustainPine v2.0 1347
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene22945 SustainPine v2.0 653
AutoFact: Unassigned protein
FL-Next: tr=E3 ubiquitin protein ligase upl2, putative; Ricinus communis (Castor bean). 0.0
Blast2go: e3 ubiquitin-protein ligase upl2-like 1.0804e-42
Internal
sp_v2.0_unigene23207 SustainPine v2.0 1193
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKT1_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin conjugating enzyme 0.0
Complete
sp_v2.0_unigene25108 SustainPine v2.0 683
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-28
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna helicase a-like protein 1.35295e-40
Putative N-terminus
sp_v2.0_unigene26470 SustainPine v2.0 1415
AutoFact: Ubiquitin carrier protein n=1 Tax=Sorghum bicolor RepID=C5XGM7_SORBI 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme x 1.00646e-32
Putative Complete
sp_v2.0_unigene27488 SustainPine v2.0 292
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 6.0e-28
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 6.46796e-34
Internal
sp_v2.0_unigene29888 SustainPine v2.0 1410
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding protein 9.78607e-28
Putative Complete
sp_v2.0_unigene33186 SustainPine v2.0 679
AutoFact: PREDICTED: similar to ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome), partial [Strongylocentrotus purpuratus] ref|XP_780810.2| PREDICTED: similar to ubiquitin protein ligase E3A (human papilloma virus E6-asso 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene35488 SustainPine v2.0 768
AutoFact: DNA methyltransferase [Nicotiana tabacum] 6.0e-38
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna methyltransferase 1.10195e-40
Internal
sp_v2.0_unigene35770 SustainPine v2.0 808
AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
Internal
sp_v2.0_unigene37146 SustainPine v2.0 397
AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 9.99995e-41
FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna helicase q-like sim-like 0.0
Internal
sp_v2.0_unigene37202 SustainPine v2.0 630
AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
Internal
sp_v2.0_unigene37675 SustainPine v2.0 741
AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
sp_v2.0_unigene37797 SustainPine v2.0 430
AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable atp-dependent rna helicase dhx36-like 0.0
Internal
sp_v2.0_unigene38321 SustainPine v2.0 620
AutoFact: ubiquitin-protein ligase 2 [Arabidopsis thaliana] sp|Q8H0T4.3|UPL2_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL2; Short=Ubiquitin-protein ligase 2 gb|AEE35045.1| ubiquitin-protein ligase 2 [Arabidopsis thaliana] 1.0e-18
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin protein ligase 1.01141e-33
Internal
sp_v2.0_unigene38471 SustainPine v2.0 857
AutoFact: DNA helicase hus2, putative n=1 Tax=Ricinus communis RepID=B9RFH2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain