Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ubiquitin-associated/translation elongation factor EF1B, N-terminal

Term: IPR000449  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene10893 SustainPine v2.0 2375
AutoFact: Plant ubiquilin, putative n=1 Tax=Ricinus communis RepID=B9S6T7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 0.0
Complete
sp_v2.0_unigene11041 SustainPine v2.0 3730
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
Putative Complete
sp_v2.0_unigene11476 SustainPine v2.0 735
AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase q-like sim-like 0.0
C-terminus
sp_v2.0_unigene11842 SustainPine v2.0 2361
AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAY34175.1| At2g12550 [Arabidopsis thaliana] gb|AEC06204.1| ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ubiquitin-associated ts-n domain-containing protein 0.0
Complete
sp_v2.0_unigene12286 SustainPine v2.0 379
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S355_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna 0.0
Internal
sp_v2.0_unigene12344 SustainPine v2.0 866
AutoFact: DEA(D/H)-box RNA helicase family protein n=5 Tax=Arabidopsis RepID=F4IM84_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable atp-dependent rna helicase dhx36-like 0.0
Internal
sp_v2.0_unigene12351 SustainPine v2.0 585
AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana] 1.0e-06
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl1-like 5.54776e-37
Internal
sp_v2.0_unigene12617 SustainPine v2.0 933
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 8.0e-13
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 1.39564e-36
Internal
sp_v2.0_unigene12902 SustainPine v2.0 1145
AutoFact: ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) [Xenopus (Silurana) tropicalis] gb|AAH67999.1| ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) [Xenopus (Silurana) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene14473 SustainPine v2.0 816
AutoFact: UBA-like n=2 Tax=Medicago truncatula RepID=Q2HSZ5_MEDTR 8.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-associated domain-containing protein 0.0
C-terminus
sp_v2.0_unigene14489 SustainPine v2.0 988
AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nascent polypeptide-associated complex subunit alpha-like 0.0
C-terminus
sp_v2.0_unigene14931 SustainPine v2.0 1549
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKT1_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin conjugating enzyme 0.0
N-terminus
sp_v2.0_unigene15467 SustainPine v2.0 1344
AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nascent polypeptide-associated complex subunit alpha-like 0.0
Complete
sp_v2.0_unigene15595 SustainPine v2.0 1259
AutoFact: Plant ubiquilin, putative n=1 Tax=Ricinus communis RepID=B9S6T7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 0.0
Complete
sp_v2.0_unigene16169 SustainPine v2.0 1350
AutoFact: Osmotic stress-activated protein kinase n=1 Tax=Nicotiana tabacum RepID=Q8RXH5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein kinase 0.0
C-terminus
sp_v2.0_unigene16443 SustainPine v2.0 1957
AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAF40452.1|AC004809_10 ESTs gb|N65605, gb|N38087, gb|T20485, gb|T13726, gb|N38339, gb|F15440 and gb|N97201 come from this gene [Arabidopsis thaliana] gb|AAL32687.1| Unknow 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ubiquitin-associated ts-n domain-containing protein 0.0
Complete
sp_v2.0_unigene16990 SustainPine v2.0 1953
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene17145 SustainPine v2.0 1174
AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 0.0
FL-Next: sp=Nascent polypeptide-associated complex subunit alpha-like protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: nascent polypeptide-associated complex subunit alpha-like 0.0
Complete
sp_v2.0_unigene17665 SustainPine v2.0 677
AutoFact: Ubiquitin carrier protein n=1 Tax=Zea mays RepID=C0P584_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 36 0.0
C-terminus
sp_v2.0_unigene18538 SustainPine v2.0 1666
AutoFact: Ubiquitin-associated (UBA) protein [Arabidopsis thaliana] emb|CAC00737.1| putative protein [Arabidopsis thaliana] gb|AAM63026.1| unknown [Arabidopsis thaliana] gb|AAO63279.1| At3g56740 [Arabidopsis thaliana] dbj|BAE99920.1| hypothetical protein [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain