Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene8575 SustainPine v2.0 1077
AutoFact: putative BRCT domain-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein breast cancer susceptibility 1 homolog 0.0
C-terminus
sp_v2.0_unigene8578 SustainPine v2.0 615
AutoFact: RING-H2 finger protein ATL51 [Arabidopsis thaliana] sp|Q9SRQ8.2|ATL51_ARATH RecName: Full=RING-H2 finger protein ATL51 gb|AAF03479.1|AC009327_18 unknown protein [Arabidopsis thaliana] gb|AAM62688.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana] 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase os04g0590900-like 2.20657e-38
N-terminus
sp_v2.0_unigene8580 SustainPine v2.0 2259
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB36_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sis3-like 0.0
Complete
sp_v2.0_unigene8627 SustainPine v2.0 1189
AutoFact: zf-UBR domain containing protein 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene8647 SustainPine v2.0 2077
AutoFact: [R] COG0666 FOG: Ankyrin repeat 3.0e-07
FL-Next: sp=Probable E3 ubiquitin-protein ligase XBOS34; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8653 SustainPine v2.0 940
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna-binding protein chloroplast 0.0
Internal
sp_v2.0_unigene8662 SustainPine v2.0 1259
AutoFact: Zinc finger family protein (Fragment) n=1 Tax=Picea abies RepID=Q3ZDI5_PICAB 2.0e-34
FL-Next: sp=Putative RING-H2 finger protein ATL69; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger family protein 3.20617e-42
Complete
sp_v2.0_unigene8675 SustainPine v2.0 972
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
N-terminus
sp_v2.0_unigene8769 SustainPine v2.0 1723
AutoFact: copine-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2 0.0
Complete
sp_v2.0_unigene8942 SustainPine v2.0 1173
AutoFact: TED3; TED3 (REVERSAL OF THE DET PHENOTYPE 3); protein binding / zinc ion binding; K06664 peroxin-2 0.0
FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8959 SustainPine v2.0 1919
AutoFact: DUF1117 multi-domain protein 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase ring1-like 0.0
C-terminus
sp_v2.0_unigene8964 SustainPine v2.0 1400
AutoFact: receptor protein kinase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g06840-like 0.0
Putative C-terminus
sp_v2.0_unigene9050 SustainPine v2.0 924
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger 0.0
Putative Complete
sp_v2.0_unigene9125 SustainPine v2.0 1088
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983C0B 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase-like transcription factor-like protein 0.0
Putative N-terminus
sp_v2.0_unigene9294 SustainPine v2.0 2119
AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9RN23_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene9358 SustainPine v2.0 865
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SLY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger 0.0
N-terminus
sp_v2.0_unigene9567 SustainPine v2.0 673
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUA7_RICCO 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 1 3.99746e-35
C-terminus
sp_v2.0_unigene9598 SustainPine v2.0 1110
AutoFact: Putative copine I (Fragment) n=1 Tax=Picea abies RepID=B2KZG6_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2-like 0.0
N-terminus
sp_v2.0_unigene9634 SustainPine v2.0 719
AutoFact: UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RLH6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: udp-glycosyltransferase 73b4 0.0
C-terminus
sp_v2.0_unigene9683 SustainPine v2.0 2255
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brca1-associated protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain