Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene6325 SustainPine v2.0 538
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAO00881.1| putative protein [Arabidopsis thaliana] gb|AAP37815.1| At5g63780 [Arabidopsis thaliana] gb|AED97797.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 5.0e-35
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: ring fyve phd zinc finger-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene6334 SustainPine v2.0 1151
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RCF4_RICCO 4.0e-25
• FL-Next: sp=RING-H2 zinc finger protein RHA1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase rha1b-like 1.75794e-33
Complete
sp_v2.0_unigene6377 SustainPine v2.0 2214
• AutoFact: Carbon catabolite repressor protein 4 homolog 5 n=2 Tax=Arabidopsis RepID=CCR4E_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: carbon catabolite repressor protein 4-like 3 0.0
Complete
sp_v2.0_unigene6413 SustainPine v2.0 1378
• AutoFact: Probable protein phosphatase 2C 68 n=3 Tax=Brassicaceae RepID=P2C68_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein phosphatase 2c 68 0.0
Putative Complete
sp_v2.0_unigene6465 SustainPine v2.0 2300
• AutoFact: ankyrin repeat-rich protein [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ankyrin repeat-rich protein 0.0
Complete
sp_v2.0_unigene6495 SustainPine v2.0 1347
• AutoFact: phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] gb|AEE30640.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phytochrome and flowering time regulatory protein 1 0.0
Putative N-terminus
sp_v2.0_unigene6557 SustainPine v2.0 519
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at1g20230 0.0
Internal
sp_v2.0_unigene6605 SustainPine v2.0 1497
• AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 0.0
Complete
sp_v2.0_unigene6612 SustainPine v2.0 321
• AutoFact: RING-H2 finger protein ATL47 n=2 Tax=Arabidopsis RepID=ATL47_ARATH 7.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 9.58564e-24
C-terminus
sp_v2.0_unigene6682 SustainPine v2.0 1850
• AutoFact: PREDICTED: similar to thioredoxin-related protein isoform 1 n=1 Tax=Vitis vinifera RepID=UPI0001983C70 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: thioredoxin-related protein 0.0
Complete
sp_v2.0_unigene6723 SustainPine v2.0 1017
• AutoFact: Putative zinc transporter n=1 Tax=Solanum lycopersicum RepID=A1YIQ6_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zip transporter 0.0
C-terminus
sp_v2.0_unigene6783 SustainPine v2.0 2053
• AutoFact: Zinc finger, RING-type [Medicago truncatula] 9.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase atl6-like 0.0
Complete
sp_v2.0_unigene6896 SustainPine v2.0 1611
• AutoFact: NEP1-interacting protein-like 2 [Arabidopsis thaliana] sp|Q8LBA0.2|NIPL2_ARATH RecName: Full=NEP1-interacting protein-like 2; AltName: Full=RING-H2 finger protein ATL24 gb|AAK91449.1| At1g74410/F1M20_9 [Arabidopsis thaliana] gb|AAM10413.1| At1g74410/F1M20 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein atl1q 0.0
Complete
sp_v2.0_unigene6974 SustainPine v2.0 2150
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974453.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974454.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001190122.1| RING/U-box domain-con 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc c3hc4 type family protein 0.0
Complete
sp_v2.0_unigene7048 SustainPine v2.0 2727
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp binding 0.0
Complete
sp_v2.0_unigene7056 SustainPine v2.0 2997
• AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein phosphatase 0.0
Complete
sp_v2.0_unigene7078 SustainPine v2.0 1151
• AutoFact: Putative RING zinc finger protein-like protein n=1 Tax=Eutrema halophilum RepID=Q8S2S3_THEHA 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein 1.53276e-38
Complete
sp_v2.0_unigene7151 SustainPine v2.0 1127
• AutoFact: RING-H2 finger protein ATL47 [Arabidopsis thaliana] sp|Q8GW38.1|ATL47_ARATH RecName: Full=RING-H2 finger protein ATL47 dbj|BAC43674.1| unknown protein [Arabidopsis thaliana] gb|AAQ55274.1| At1g23980 [Arabidopsis thaliana] gb|AEE30463.1| RING-H2 finger pro 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene7228 SustainPine v2.0 1647
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein atl3c 0.0
Complete
sp_v2.0_unigene7231 SustainPine v2.0 1716
• AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
• FL-Next: sp=Peroxisome biogenesis factor 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: peroxisome biogenesis factor 10-like 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain