Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene91189 SustainPine v2.0 525
AutoFact: RING-H2 zinc finger protein [Cucumis melo] 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
C-terminus
sp_v2.0_unigene91276 SustainPine v2.0 721
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF23258.1|AC015985_16 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAF23312.1|AC016661_37 unknown protein [Arabidopsis thaliana] gb|AAL66972.1| putative RING zinc finger protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase mgrn1-like 0.0
Internal
sp_v2.0_unigene91304 SustainPine v2.0 566
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
Internal
sp_v2.0_unigene92009 SustainPine v2.0 1001
AutoFact: protein phosphatase 2C homolog [Mesembryanthemum crystallinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
N-terminus
sp_v2.0_unigene92030 SustainPine v2.0 910
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001190848.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAE99787.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85222.1| RING/U-box domain-containing protein [Ar 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene92262 SustainPine v2.0 530
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.37591e-43
N-terminus
sp_v2.0_unigene92356 SustainPine v2.0 363
AutoFact: RING-H2 finger protein ATL2 n=2 Tax=Arabidopsis RepID=ATL2_ARATH 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain