Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2843 SustainPine v2.0 1658
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
C-terminus
sp_v2.0_unigene2847 SustainPine v2.0 1217
AutoFact: Endonuclease/exonuclease/phosphatase family protein-like n=2 Tax=Oryza sativa RepID=Q5ZE24_ORYSJ 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.5861e-44
Putative Complete
sp_v2.0_unigene2877 SustainPine v2.0 2647
AutoFact: C3H4 type zinc finger protein [Arabidopsis thaliana] gb|AAL66968.1| unknown protein [Arabidopsis thaliana] gb|AAL91189.1| putative protein [Arabidopsis thaliana] gb|AAM20289.1| unknown protein [Arabidopsis thaliana] gb|AEE86087.1| C3H4 type zinc finger pr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene2918 SustainPine v2.0 1578
AutoFact: E3 ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName: Full=RING finger protein At4g11680 gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana] gb|AAR23720.1| At4g11680/ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene2948 SustainPine v2.0 1462
AutoFact: Ischemia/reperfusion inducible protein n=3 Tax=Andropogoneae RepID=B6T950_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: ischemia reperfusion inducible protein 0.0
Putative Complete
sp_v2.0_unigene2955 SustainPine v2.0 1593
AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene3157 SustainPine v2.0 1478
AutoFact: transcription factor jumonji domain-containing protein [Arabidopsis thaliana] dbj|BAH30353.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33952.1| transcription factor jumonji domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene3233 SustainPine v2.0 2270
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AED91346.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Complete
sp_v2.0_unigene3364 SustainPine v2.0 1608
AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene3372 SustainPine v2.0 1688
AutoFact: C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] dbj|BAB09828.1| unnamed protein product [Arabidopsis thaliana] gb|AED93123.1| C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: c3hc4-type ring finger domain-containing protein 0.0
C-terminus
sp_v2.0_unigene3496 SustainPine v2.0 2146
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene3631 SustainPine v2.0 1544
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGI2.1|Y1677_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g67720; Flags: Precursor gb|ACN59267.1| leucine-rich repeat receptor-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g67720-like 0.0
Putative C-terminus
sp_v2.0_unigene3638 SustainPine v2.0 1649
AutoFact: JmjC domain containing protein 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene3642 SustainPine v2.0 1475
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUV3_RICCO 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.31492e-35
C-terminus
sp_v2.0_unigene3790 SustainPine v2.0 1388
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene3848 SustainPine v2.0 4270
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene3913 SustainPine v2.0 716
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAO00881.1| putative protein [Arabidopsis thaliana] gb|AAP37815.1| At5g63780 [Arabidopsis thaliana] gb|AED97797.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 4.0e-19
FL-Next: tr=At5g63780; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 1.9099e-22
C-terminus
sp_v2.0_unigene3928 SustainPine v2.0 2128
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene4010 SustainPine v2.0 2682
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RS95_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase at4g11680-like 0.0
Complete
sp_v2.0_unigene4164 SustainPine v2.0 2072
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helicase and zinc finger domain-containing protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain