Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene79847 SustainPine v2.0 341
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3H0_RICCO 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 1.35031e-39
C-terminus
sp_v2.0_unigene79910 SustainPine v2.0 461
AutoFact: similar to chaperonin containing TCP-1 complex gamma chain [Arabidopsis thaliana] 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit gamma 3.63174e-19
C-terminus
sp_v2.0_unigene80018 SustainPine v2.0 764
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 2.3078e-41
Putative Complete
sp_v2.0_unigene80058 SustainPine v2.0 677
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11599.1|AF424605_1 AT4g31450/F3L17_20 [Arabidopsis thaliana] gb|AAN73297.1| At4g31450/F3L17_20 [Arabidopsis thaliana] gb|AEE85915.1| RING/U-box domain-containing protein [Arabidopsis thalia 3.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 5.60519e-44
Complete
sp_v2.0_unigene80180 SustainPine v2.0 541
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 7.56928e-39
Putative N-terminus
sp_v2.0_unigene80191 SustainPine v2.0 354
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase mgrn1-like 5.99896e-42
C-terminus
sp_v2.0_unigene80243 SustainPine v2.0 442
AutoFact: Zinc finger family protein (Fragment) n=2 Tax=Picea RepID=Q3ZDI3_PICAB 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 1.05162e-23
Putative C-terminus
sp_v2.0_unigene80503 SustainPine v2.0 647
AutoFact: Vacuolar ATP synthase subunit G1 n=1 Tax=Jatropha curcas RepID=D6BR50_9ROSI 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar atp synthase subunit g 0.0
Complete
sp_v2.0_unigene80698 SustainPine v2.0 765
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Putative C-terminus
sp_v2.0_unigene80762 SustainPine v2.0 471
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.73362e-19
N-terminus
sp_v2.0_unigene80933 SustainPine v2.0 469
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100272794 0.0
Putative N-terminus
sp_v2.0_unigene81224 SustainPine v2.0 504
AutoFact: E3 ubiquitin ligase BIG BROTHER [Arabidopsis thaliana] ref|NP_001030922.1| E3 ubiquitin ligase BIG BROTHER [Arabidopsis thaliana] sp|Q8L649.1|BB_ARATH RecName: Full=E3 ubiquitin ligase BIG BROTHER; AltName: Full=Protein ENHANCER OF DA1-1 emb|CAD32249.1| p 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Putative N-terminus
sp_v2.0_unigene81437 SustainPine v2.0 597
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 6.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 6.40506e-41
Putative N-terminus
sp_v2.0_unigene81504 SustainPine v2.0 338
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nbs lrr 6.92362e-38
Putative C-terminus
sp_v2.0_unigene82115 SustainPine v2.0 880
AutoFact: putative ring-box protein [Oryza sativa Japonica Group] dbj|BAD44884.1| putative ring-box protein [Oryza sativa Japonica Group] gb|EEE53718.1| hypothetical protein OsJ_00057 [Oryza sativa Japonica Group] 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene82983 SustainPine v2.0 608
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytoalexin-deficient 4-2 protein 2.77903e-29
Internal
sp_v2.0_unigene83020 SustainPine v2.0 534
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 9.44731e-17
N-terminus
sp_v2.0_unigene83138 SustainPine v2.0 544
AutoFact: RING-box protein 1a n=7 Tax=rosids RepID=RBX1A_ARATH 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-box protein 0.0
Complete
sp_v2.0_unigene83140 SustainPine v2.0 430
AutoFact: putative ring-box Roc1/Rbx1/Hrt1 protein [Olimarabidopsis pumila] 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene83405 SustainPine v2.0 858
AutoFact: putative ring-box Roc1/Rbx1/Hrt1 protein [Olimarabidopsis pumila] 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-box protein 3.78351e-44
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain