Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene77156 SustainPine v2.0 491
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v2.0_unigene77437 SustainPine v2.0 521
AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
C-terminus
sp_v2.0_unigene77460 SustainPine v2.0 416
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 2.31396e-33
Putative C-terminus
sp_v2.0_unigene77541 SustainPine v2.0 561
AutoFact: ring finger and CHY zinc finger domain-containing protein 1 [Arabidopsis thaliana] dbj|BAB10613.1| PGPD14 protein [Arabidopsis thaliana] gb|AAK96553.1| AT5g22920/MRN17_15 [Arabidopsis thaliana] gb|AAO11551.1| At5g22920/MRN17_15 [Arabidopsis thaliana] gb|A 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 1.0511e-25
Complete
sp_v2.0_unigene77617 SustainPine v2.0 394
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene77721 SustainPine v2.0 348
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 5.28522e-10
C-terminus
sp_v2.0_unigene78182 SustainPine v2.0 299
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 9.48006e-22
Putative Complete
sp_v2.0_unigene78287 SustainPine v2.0 683
AutoFact: 60S ribosomal protein l7a [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l7a 0.0
Putative N-terminus
sp_v2.0_unigene78429 SustainPine v2.0 399
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein 0_2658_01 [Pinus radiata] 2.14658e-15
N-terminus
sp_v2.0_unigene78565 SustainPine v2.0 930
AutoFact: RNA-binding protein, putative [Musa acuminata] 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
Putative C-terminus
sp_v2.0_unigene78583 SustainPine v2.0 1006
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 8.02419e-36
N-terminus
sp_v2.0_unigene78637 SustainPine v2.0 1174
AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase ring1-like 0.0
Complete
sp_v2.0_unigene78725 SustainPine v2.0 525
AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.05738e-18
C-terminus
sp_v2.0_unigene79307 SustainPine v2.0 297
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v2.0_unigene79467 SustainPine v2.0 659
AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] gb|AAK44172.1|AF370357_1 unknown protein [Arabidopsis thaliana] gb|AAL15193.1| unknown protein [Arabidopsis thaliana] gb|AAM61248.1| unknown [Arabidopsis thaliana] gb|AEE35285.1| C3HC4-type RING finger 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
N-terminus
sp_v2.0_unigene79577 SustainPine v2.0 698
AutoFact: GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene79734 SustainPine v2.0 446
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_849554.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM20658.1| putative protein [Arabidopsis thaliana] gb|AAN15624.1| putative protein [Arabidopsis thaliana] dbj|BAH2 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 4.74384e-18
N-terminus
sp_v2.0_unigene79813 SustainPine v2.0 591
AutoFact: 60S ribosomal protein L7a n=11 Tax=Poaceae RepID=RL7A_ORYSJ 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l7a 6.24944e-36
Putative N-terminus
sp_v2.0_unigene79821 SustainPine v2.0 389
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SCJ9_RICCO 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger and chy zinc finger domain-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene79831 SustainPine v2.0 479
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9S6B4_RICCO 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 2.46694e-31
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain