Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene69110 SustainPine v2.0 644
AutoFact: Lectin-like receptor kinase 7;3 n=1 Tax=Medicago truncatula RepID=Q6UY58_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Putative C-terminus
sp_v2.0_unigene69336 SustainPine v2.0 257
AutoFact: Unassigned protein
FL-Next: sp=E3 ubiquitin-protein ligase COP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase cop1 2.77979e-28
Internal
sp_v2.0_unigene69455 SustainPine v2.0 395
AutoFact: cleavage and polyadenylation specificity factor subunit 3-II [Arabidopsis thaliana] sp|Q8GUU3.2|CPS3B_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 3-II; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa su 4.0e-20
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-II; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity 1.63297e-31
Internal
sp_v2.0_unigene69774 SustainPine v2.0 456
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein binding 8.13557e-18
Internal
sp_v2.0_unigene69799 SustainPine v2.0 287
AutoFact: Shaggy-like kinase [Triticum aestivum] 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 7.16768e-30
Internal
sp_v2.0_unigene70124 SustainPine v2.0 675
AutoFact: PREDICTED: e3 ubiquitin-protein ligase DTX3L-like isoform 3 [Macaca mulatta] 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase dtx3l-like 5.06009e-42
Putative Complete
sp_v2.0_unigene70430 SustainPine v2.0 450
AutoFact: Protein phosphatase-2c (Fragment) n=1 Tax=Mesembryanthemum crystallinum RepID=O82479_MESCR 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 0.0
Internal
sp_v2.0_unigene70662 SustainPine v2.0 239
AutoFact: putative ring-box Roc1/Rbx1/Hrt1 protein [Olimarabidopsis pumila] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-box protein 2.41157e-25
C-terminus
sp_v2.0_unigene71281 SustainPine v2.0 154
AutoFact: RING-H2 finger protein RHA1a [Arabidopsis thaliana] gb|AAM63325.1| RING-H2 finger protein RHA1a-like protein [Arabidopsis thaliana] 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g63840 3.32362e-20
Putative C-terminus
sp_v2.0_unigene71392 SustainPine v2.0 481
AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 9.72424e-21
Internal
sp_v2.0_unigene71796 SustainPine v2.0 388
AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 2.68218e-30
Complete
sp_v2.0_unigene72155 SustainPine v2.0 271
AutoFact: RING-H2 finger protein ATL47 n=2 Tax=Arabidopsis RepID=ATL47_ARATH 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.93203e-16
C-terminus
sp_v2.0_unigene72880 SustainPine v2.0 171
AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 3.0e-06
FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitination-promoting complex protein 1 8.39441e-12
Internal
sp_v2.0_unigene72921 SustainPine v2.0 347
AutoFact: putative E3 ubiquitin-protein ligase ARI1 [Arabidopsis thaliana] sp|Q949V6.1|ARI1_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI1; AltName: Full=ARIADNE-like protein ARI1; AltName: Full=Protein ariadne homolog 1 gb|AAK92801.1| unknown protei 1.0e-35
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase ari1 1.35926e-43
Internal
sp_v2.0_unigene73453 SustainPine v2.0 342
AutoFact: Membrane associated ring finger 1,8, putative n=1 Tax=Ricinus communis RepID=B9S8W6_RICCO 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane associated ring finger 1.77646e-17
C-terminus
sp_v2.0_unigene73518 SustainPine v2.0 378
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.72903e-12
C-terminus
sp_v2.0_unigene73633 SustainPine v2.0 475
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.82679e-24
N-terminus
sp_v2.0_unigene73812 SustainPine v2.0 230
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.27197e-13
C-terminus
sp_v2.0_unigene74443 SustainPine v2.0 446
AutoFact: DUF716 domain containing protein 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene74495 SustainPine v2.0 308
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.03875e-07
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain