Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene66980 SustainPine v2.0 481
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.36114e-19
N-terminus
sp_v2.0_unigene67079 SustainPine v2.0 455
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene67097 SustainPine v2.0 534
• AutoFact: Os09g0327200 protein n=4 Tax=Oryza sativa RepID=Q0J2K9_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
Internal
sp_v2.0_unigene67167 SustainPine v2.0 348
• AutoFact: E3 ubiquitin-protein ligase BAH1 [Arabidopsis thaliana] sp|Q9SRX9.1|BAH1_ARATH RecName: Full=E3 ubiquitin-protein ligase BAH1; AltName: Full=Protein BENZOIC ACID HYPERSENSITIVE 1; AltName: Full=Protein NITROGEN LIMITATION ADAPTATION gb|AAF02879.1|AC009525 3.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 9.80467e-16
C-terminus
sp_v2.0_unigene67583 SustainPine v2.0 601
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RS80_RICCO 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chy and ctchy and ring-type zinc finger protein 0.0
Internal
sp_v2.0_unigene67652 SustainPine v2.0 361
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-binding protein chloroplast 8.89514e-39
Putative N-terminus
sp_v2.0_unigene67731 SustainPine v2.0 418
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAG52430.1|AC018848_1 putative RING zinc finger protein; 53384-54880 [Arabidopsis thaliana] gb|AAL32923.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAN15389.1| putative RING 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: e3 ubiquitin-protein ligase at4g11680-like 3.85781e-15
Internal
sp_v2.0_unigene67738 SustainPine v2.0 166
• AutoFact: Ssm4 protein, putative n=1 Tax=Ricinus communis RepID=B9RYE5_RICCO 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: ring u-box domain-containing protein 2.0609e-19
Internal
sp_v2.0_unigene67846 SustainPine v2.0 261
• AutoFact: CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] gb|AED93463.1| CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chy and ctchy and ring-type zinc finger protein 1.63334e-28
Internal
sp_v2.0_unigene67851 SustainPine v2.0 194
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AEE32188.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
• Blast2go: ring u-box domain-containing protein 8.22954e-17
Internal
sp_v2.0_unigene67867 SustainPine v2.0 375
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9RVY6_RICCO 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: concanavalin a-like lectin kinase-like protein 0.0
Internal
sp_v2.0_unigene67955 SustainPine v2.0 499
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAC06154.1| expressed protein [Arabidopsis thaliana] gb|AAO00741.1| Unknown protein [Arabidopsis thaliana] gb|AAP13386.1| At2g45530 [Arabidopsis thaliana] gb|AEC10566.1| RING/U-box domain-cont 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 6.58268e-23
Internal
sp_v2.0_unigene68318 SustainPine v2.0 338
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: protein 2.19988e-40
Putative C-terminus
sp_v2.0_unigene68503 SustainPine v2.0 440
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 4.0e-35
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
• Blast2go: e3 ubiquitin-protein ligase shprh-like 7.72445e-35
Internal
sp_v2.0_unigene68553 SustainPine v2.0 491
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 8.40779e-45
Putative C-terminus
sp_v2.0_unigene68568 SustainPine v2.0 208
• AutoFact: Synaptonemal complex protein, putative n=1 Tax=Ricinus communis RepID=B9S1H3_RICCO 8.0e-11
• FL-Next: tr=Synaptonemal complex protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: e3 ubiquitin-protein ligase rf298-like 1.06452e-11
Internal
sp_v2.0_unigene68645 SustainPine v2.0 396
• AutoFact: putative zinc finger protein [Oryza sativa Japonica Group] 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: zinc finger 8.30269e-42
Internal
sp_v2.0_unigene68689 SustainPine v2.0 422
• AutoFact: PREDICTED: similar to deltex 2 [Strongylocentrotus purpuratus] 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase dtx3l-like 0.0
Internal
sp_v2.0_unigene68809 SustainPine v2.0 330
• AutoFact: RING finger and CHY zinc finger domain-containing protein 1 n=2 Tax=Zea mays RepID=B6T4N6_MAIZE 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger and chy zinc finger domain-containing protein 1 1.52761e-23
Internal
sp_v2.0_unigene68939 SustainPine v2.0 285
• AutoFact: putative methyltransferase domain-containing protein [Arabidopsis thaliana] emb|CAB80933.1| hypothetical protein [Arabidopsis thaliana] gb|AEE81998.1| putative methyltransferase domain-containing protein [Arabidopsis thaliana] 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.6372e-37
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain