Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene63863 SustainPine v2.0 327
• AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAF64543.1| hypothetical protein [Arabidopsis thaliana] gb|AAT69207.1| hypothetical protein At3g05390 [Arabidopsis thaliana] gb|AEE74232.1| uncharacterized protein [Arabidopsis thaliana] 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: uncharacterized protein 4.97529e-21
C-terminus
sp_v2.0_unigene63941 SustainPine v2.0 501
• AutoFact: GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: shaggy-related protein kinase gamma 7.74404e-28
Putative C-terminus
sp_v2.0_unigene64499 SustainPine v2.0 626
• AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I6V0_POPTR 0.0
• FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: trna pseudouridine synthase-like 0.0
Internal
sp_v2.0_unigene64845 SustainPine v2.0 556
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
Internal
sp_v2.0_unigene64908 SustainPine v2.0 554
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8B0_RICCO 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 4.48661e-12
Internal
sp_v2.0_unigene65087 SustainPine v2.0 420
• AutoFact: E3 ubiquitin ligase-like protein [Arabidopsis thaliana] gb|AAM91555.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAN15327.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD43976.1| unknown protein [Arabidopsis thaliana] 1.4013e-45
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: e3 ubiquitin ligase-like protein 0.0
Putative N-terminus
sp_v2.0_unigene65168 SustainPine v2.0 406
• AutoFact: ring finger and CHY zinc finger domain-containing protein 1 [Arabidopsis thaliana] dbj|BAB10613.1| PGPD14 protein [Arabidopsis thaliana] gb|AAK96553.1| AT5g22920/MRN17_15 [Arabidopsis thaliana] gb|AAO11551.1| At5g22920/MRN17_15 [Arabidopsis thaliana] gb|A 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger and chy zinc finger domain-containing protein 8.87706e-39
Putative N-terminus
sp_v2.0_unigene65197 SustainPine v2.0 487
• AutoFact: pfam00097, zf-C3HC4, Zinc finger, C3HC4 type (RING finger) 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
Internal
sp_v2.0_unigene65215 SustainPine v2.0 499
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide repeat-like family protein 0.0
Internal
sp_v2.0_unigene65223 SustainPine v2.0 305
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 2.44061e-12
N-terminus
sp_v2.0_unigene65479 SustainPine v2.0 457
• AutoFact: putative E3 ubiquitin-protein ligase ARI1 [Arabidopsis thaliana] sp|Q949V6.1|ARI1_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI1; AltName: Full=ARIADNE-like protein ARI1; AltName: Full=Protein ariadne homolog 1 gb|AAK92801.1| unknown protei 1.0e-15
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase ari1 1.35646e-42
Putative C-terminus
sp_v2.0_unigene65641 SustainPine v2.0 326
• AutoFact: Zinc-finger transcription factor n=1 Tax=Ananas comosus RepID=C0KYN2_ANACO 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 9.08708e-27
N-terminus
sp_v2.0_unigene65746 SustainPine v2.0 477
• AutoFact: Unassigned protein
unknown
sp_v2.0_unigene65781 SustainPine v2.0 466
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
Putative N-terminus
sp_v2.0_unigene66023 SustainPine v2.0 442
• AutoFact: Unassigned protein
unknown
sp_v2.0_unigene66115 SustainPine v2.0 661
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SMC2_RICCO 2.0e-38
• FL-Next: tr=Protein binding protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: protein binding 3.61535e-43
Internal
sp_v2.0_unigene66381 SustainPine v2.0 568
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SCJ9_RICCO 7.00649e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 1.32283e-42
Internal
sp_v2.0_unigene66401 SustainPine v2.0 443
• AutoFact: RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo] 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene66570 SustainPine v2.0 430
• AutoFact: la62f09.g1 Cycas ovule - normalized (NYBG) Cycas rumphii cDNA 3', mRNA sequence. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: organelle transcript processing 82 0.0
Internal
sp_v2.0_unigene66607 SustainPine v2.0 546
• AutoFact: E3 ubiquitin-protein ligase BAH1 [Arabidopsis thaliana] sp|Q9SRX9.1|BAH1_ARATH RecName: Full=E3 ubiquitin-protein ligase BAH1; AltName: Full=Protein BENZOIC ACID HYPERSENSITIVE 1; AltName: Full=Protein NITROGEN LIMITATION ADAPTATION gb|AAF02879.1|AC009525 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase bah1 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain