Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene59547 SustainPine v2.0 781
AutoFact: E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana] sp|Q9FY48.2|KEG_ARATH RecName: Full=E3 ubiquitin-protein ligase KEG; AltName: Full=Protein KEEP ON GOING; AltName: Full=RING finger protein KEG gb|ABC46683.1| RING E3 ligase protein [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase keg 0.0
Putative C-terminus
sp_v2.0_unigene59792 SustainPine v2.0 173
AutoFact: WS027101.CR_J20 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS027101_J20 3', mRNA sequence. 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.69406e-27
Internal
sp_v2.0_unigene59934 SustainPine v2.0 571
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
N-terminus
sp_v2.0_unigene59981 SustainPine v2.0 1263
AutoFact: Lectin-receptor like protein kinase 3 n=1 Tax=Nicotiana tabacum RepID=A2V6V5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
N-terminus
sp_v2.0_unigene59990 SustainPine v2.0 838
AutoFact: DUF248 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
sp_v2.0_unigene60027 SustainPine v2.0 506
AutoFact: RING-H2 zinc finger protein-like [Arabidopsis thaliana] 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.41689e-29
Internal
sp_v2.0_unigene60226 SustainPine v2.0 912
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl3c 0.0
C-terminus
sp_v2.0_unigene60238 SustainPine v2.0 994
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK62600.1| AT3g62770/F26K9_200 [Arabidopsis thaliana] gb|AAL15394.1| AT3g62770/F26K9_200 [Arabidopsis thaliana] gb|AEE80389.1| transducin/WD40 domain-containing protein [Arabidopsis thal 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat domain phosphoinositide-interacting protein 0.0
Internal
sp_v2.0_unigene60298 SustainPine v2.0 883
AutoFact: ring finger and CHY zinc finger domain-containing protein 1 [Arabidopsis thaliana] dbj|BAB10613.1| PGPD14 protein [Arabidopsis thaliana] gb|AAK96553.1| AT5g22920/MRN17_15 [Arabidopsis thaliana] gb|AAO11551.1| At5g22920/MRN17_15 [Arabidopsis thaliana] gb|A 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 2.08191e-40
Putative Complete
sp_v2.0_unigene60591 SustainPine v2.0 720
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
Putative N-terminus
sp_v2.0_unigene60709 SustainPine v2.0 862
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v2.0_unigene60905 SustainPine v2.0 987
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S0D8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger and chy zinc finger domain-containing protein 1-like 0.0
Putative Complete
sp_v2.0_unigene61159 SustainPine v2.0 624
AutoFact: NEP1-interacting protein-like 2 [Arabidopsis thaliana] sp|Q8LBA0.2|NIPL2_ARATH RecName: Full=NEP1-interacting protein-like 2; AltName: Full=RING-H2 finger protein ATL24 gb|AAK91449.1| At1g74410/F1M20_9 [Arabidopsis thaliana] gb|AAM10413.1| At1g74410/F1M20 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl1q 0.0
Putative C-terminus
sp_v2.0_unigene61314 SustainPine v2.0 421
AutoFact: rhysin2/deltex3-a, Ci-Rhysin2/Deltex3-a; rhysin2/deltex3-a protein; K06058 deltex 6.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase dtx3l-like 2.01529e-28
N-terminus
sp_v2.0_unigene61449 SustainPine v2.0 358
AutoFact: plant viral-response family protein-like [Oryza sativa Japonica Group] gb|EEE69814.1| hypothetical protein OsJ_29552 [Oryza sativa Japonica Group] 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.60519e-45
Internal
sp_v2.0_unigene61514 SustainPine v2.0 1497
AutoFact: CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] gb|AED93462.1| CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] 9.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chy and ctchy and ring-type zinc finger protein 5.51613e-19
Putative Complete
sp_v2.0_unigene61536 SustainPine v2.0 526
AutoFact: Anaphase-promoting complex subunit 11 n=4 Tax=rosids RepID=F4J9K5_ARATH 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: anaphase-promoting complex subunit 11 0.0
Putative Complete
sp_v2.0_unigene61741 SustainPine v2.0 469
AutoFact: putative methyltransferase PMT21 [Arabidopsis thaliana] ref|NP_849408.1| putative methyltransferase PMT21 [Arabidopsis thaliana] sp|Q94II3.1|PMTL_ARATH RecName: Full=Probable methyltransferase PMT21; AltName: Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 3 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyltransferase pmt20 1.1643e-32
Internal
sp_v2.0_unigene61803 SustainPine v2.0 721
AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene61838 SustainPine v2.0 575
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain