Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene55688 SustainPine v2.0 352
AutoFact: putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) [Oryza sativa Japonica Group] 1.0e-26
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 5.16179e-31
Internal
sp_v2.0_unigene55738 SustainPine v2.0 149
AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 1.0e-09
FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 2.79831e-16
Internal
sp_v2.0_unigene55769 SustainPine v2.0 270
AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 1.0e-24
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Ostreococcus lucimarinus (strain CCE9901). 0.0
Blast2go: preprotein translocase seca-like protein 4.62089e-29
Internal
sp_v2.0_unigene55849 SustainPine v2.0 544
AutoFact: 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Zea mays RepID=B6SHU3_MAIZE 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-hydroxyisobutyrate dehydrogenase 5.49347e-25
N-terminus
sp_v2.0_unigene56765 SustainPine v2.0 339
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene56940 SustainPine v2.0 564
AutoFact: ring-H2 zinc finger protein [Zea mays] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.91991e-23
C-terminus
sp_v2.0_unigene57224 SustainPine v2.0 329
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_849790.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_001117462.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAF87887.1| 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene57257 SustainPine v2.0 217
AutoFact: putative receptor-like protein kinase 2 [Oryza sativa Japonica Group] 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at5g49770-like 7.07806e-26
Internal
sp_v2.0_unigene57647 SustainPine v2.0 532
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.04467e-44
C-terminus
sp_v2.0_unigene57986 SustainPine v2.0 389
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 8.44658e-20
Putative N-terminus
sp_v2.0_unigene58153 SustainPine v2.0 511
AutoFact: Receptor protein kinase-like protein n=1 Tax=Capsicum annuum RepID=Q8VZH5_CAPAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: feronia receptor-like kinase 0.0
Internal
sp_v2.0_unigene58169 SustainPine v2.0 396
AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 1.0e-27
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 1.00971e-33
Internal
sp_v2.0_unigene58417 SustainPine v2.0 554
AutoFact: putative zinc finger protein [Oryza sativa Japonica Group] 7.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase ring1a-like 0.0
N-terminus
sp_v2.0_unigene58701 SustainPine v2.0 256
AutoFact: Kinase-like protein (Fragment) n=4 Tax=Corylus avellana RepID=C7A7Q0_CORAV 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinase-like protein 3.1767e-29
Internal
sp_v2.0_unigene58871 SustainPine v2.0 344
AutoFact: RING-H2 finger protein ATL43 [Arabidopsis thaliana] gb|AAW81728.1| At5g05810 [Arabidopsis thaliana] gb|AAX49381.1| At5g05810 [Arabidopsis thaliana] gb|AED90928.1| RING-H2 finger protein ATL43 [Arabidopsis thaliana] 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl43-like 2.33238e-23
Internal
sp_v2.0_unigene58925 SustainPine v2.0 575
AutoFact: putative protein phosphatase 2C 63 [Arabidopsis thaliana] sp|O81760.1|P2C63_ARATH RecName: Full=Probable protein phosphatase 2C 63; Short=AtPP2C63 gb|AAK50092.1|AF372953_1 AT4g33920/F17I5_110 [Arabidopsis thaliana] emb|CAA19874.1| putative protein [Arabid 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable protein phosphatase 2c 63-like 1.37878e-34
N-terminus
sp_v2.0_unigene59368 SustainPine v2.0 855
AutoFact: Unassigned protein
FL-Next: sp=MND1-interacting protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase rf298-like 0.0
Putative N-terminus
sp_v2.0_unigene59449 SustainPine v2.0 1305
AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase dhx16 0.0
Internal
sp_v2.0_unigene59477 SustainPine v2.0 455
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 6.77236e-19
Internal
sp_v2.0_unigene59487 SustainPine v2.0 398
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 4.76396e-14
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain