Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene51522 SustainPine v2.0 328
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB11261.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36261.1| unknown protein [Arabidopsis thaliana] gb|AAM14133.1| unknown protein [Arabidopsis thaliana] gb|AED96751.1| RING/U-bo 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.1799e-22
Internal
sp_v2.0_unigene51652 SustainPine v2.0 224
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.33829e-23
Internal
sp_v2.0_unigene51844 SustainPine v2.0 462
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9STH4_RICCO 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.65063e-41
Putative C-terminus
sp_v2.0_unigene52518 SustainPine v2.0 354
AutoFact: RING-H2 finger protein ATL47 [Arabidopsis thaliana] sp|Q8GW38.1|ATL47_ARATH RecName: Full=RING-H2 finger protein ATL47 dbj|BAC43674.1| unknown protein [Arabidopsis thaliana] gb|AAQ55274.1| At1g23980 [Arabidopsis thaliana] gb|AEE30463.1| RING-H2 finger pro 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.53479e-37
Putative C-terminus
sp_v2.0_unigene52610 SustainPine v2.0 299
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 7.08968e-22
Internal
sp_v2.0_unigene52755 SustainPine v2.0 388
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 4.76359e-33
Internal
sp_v2.0_unigene52765 SustainPine v2.0 345
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.72474e-32
Internal
sp_v2.0_unigene52796 SustainPine v2.0 458
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v2.0_unigene53222 SustainPine v2.0 412
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 7.20012e-12
N-terminus
sp_v2.0_unigene53447 SustainPine v2.0 315
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 8.10876e-28
C-terminus
sp_v2.0_unigene53515 SustainPine v2.0 350
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9T428_RICCO 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
sp_v2.0_unigene53995 SustainPine v2.0 213
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 2.0e-21
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 1.73946e-25
Internal
sp_v2.0_unigene54177 SustainPine v2.0 497
AutoFact: RING-H2 finger protein ATL60 n=2 Tax=Arabidopsis RepID=ATL60_ARATH 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger 1.39929e-33
N-terminus
sp_v2.0_unigene54811 SustainPine v2.0 483
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g26782, mitochondrial; Flags: Precursor dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thal 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene54841 SustainPine v2.0 368
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat-like family protein 0.0
Internal
sp_v2.0_unigene54946 SustainPine v2.0 446
AutoFact: E3 ubiquitin-protein ligase listerin n=5 Tax=Camelineae RepID=LTN1_ARATH 5.0e-32
FL-Next: sp=E3 ubiquitin-protein ligase listerin; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ring zinc finger-containing protein 2.99065e-41
Internal
sp_v2.0_unigene55053 SustainPine v2.0 357
AutoFact: PREDICTED: e3 ubiquitin-protein ligase TRIM37-like isoform 3 [Macaca mulatta] ref|XP_001107393.2| PREDICTED: e3 ubiquitin-protein ligase TRIM37-like isoform 6 [Macaca mulatta] 1.0e-24
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: tripartite motif-containing 37 0.0
Internal
sp_v2.0_unigene55155 SustainPine v2.0 267
AutoFact: Protein translocase subunit secA (Fragment) n=1 Tax=Jatropha curcas RepID=E6NU73_9ROSI 4.0e-32
FL-Next: sp=Protein translocase subunit SecA; Cyanidioschyzon merolae (Red alga). Plastid; Chloroplast. 0.0
Blast2go: preprotein translocase seca-like protein 2.17625e-38
Internal
sp_v2.0_unigene55224 SustainPine v2.0 269
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 1.0e-18
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 histone linker phd ring 4.89645e-22
Internal
sp_v2.0_unigene55420 SustainPine v2.0 238
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 7.56653e-33
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain