Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene45880 SustainPine v2.0 317
AutoFact: ATP-dependent RNA helicase, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C7G2_ARATH 8.99998e-41
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna 1.32927e-41
Internal
sp_v2.0_unigene46111 SustainPine v2.0 505
AutoFact: concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] sp|O81291.1|LRK44_ARATH RecName: Full=L-type lectin-domain containing receptor kinase IV.4; Short=LecRK-IV.4; Flags: Precursor gb|AAC19274.1| T14P8.4 [Arabidopsis thaliana] emb|CAB80735 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: concanavalin a-like lectin kinase-like protein 0.0
Internal
sp_v2.0_unigene46235 SustainPine v2.0 589
AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 0.0
FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene46553 SustainPine v2.0 396
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H252_POPTR 5.0e-30
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 6.26027e-35
Internal
sp_v2.0_unigene46983 SustainPine v2.0 500
AutoFact: ubiquitin-protein ligase E3-alpha-like protein [Arabidopsis thaliana] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 8.02821e-34
N-terminus
sp_v2.0_unigene47505 SustainPine v2.0 549
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inter-alpha-trypsin inhibitor heavy chain h3 3.51795e-29
C-terminus
sp_v2.0_unigene48341 SustainPine v2.0 895
AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase bah1-like protein 0.0
Putative C-terminus
sp_v2.0_unigene48689 SustainPine v2.0 441
AutoFact: Vacuolar protein sorting vps41, putative n=1 Tax=Ricinus communis RepID=B9SCM9_RICCO 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: vacuolar protein sorting-associated protein 41 homolog 0.0
Internal
sp_v2.0_unigene48748 SustainPine v2.0 467
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.10665e-25
N-terminus
sp_v2.0_unigene48759 SustainPine v2.0 411
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
N-terminus
sp_v2.0_unigene48871 SustainPine v2.0 463
AutoFact: PREDICTED: similar to thioredoxin-related protein isoform 1 n=1 Tax=Vitis vinifera RepID=UPI0001983C70 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin-related protein 0.0
N-terminus
sp_v2.0_unigene48923 SustainPine v2.0 364
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.5189e-17
C-terminus
sp_v2.0_unigene49463 SustainPine v2.0 288
AutoFact: Zinc finger, RING-type [Medicago truncatula] 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin ligase-like protein 8.29583e-27
C-terminus
sp_v2.0_unigene49802 SustainPine v2.0 357
AutoFact: putative RING zinc finger protein [Arabidopsis thaliana] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin-related protein 1.03779e-26
Internal
sp_v2.0_unigene49807 SustainPine v2.0 289
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUA7_RICCO 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein rha3b 2.02103e-26
Internal
sp_v2.0_unigene49988 SustainPine v2.0 175
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 7.22703e-24
Internal
sp_v2.0_unigene50241 SustainPine v2.0 491
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein chloroplast 0.0
Putative Complete
sp_v2.0_unigene51045 SustainPine v2.0 325
AutoFact: Streptomyces cyclase/dehydrase family protein [Brassica oleracea] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.64845e-43
Internal
sp_v2.0_unigene51131 SustainPine v2.0 225
AutoFact: ankyrin-repeat containing protein [Arabidopsis thaliana] 9.0e-19
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase keg 5.56783e-28
Internal
sp_v2.0_unigene51210 SustainPine v2.0 507
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inter-alpha-trypsin inhibitor heavy chain h3 1.21692e-27
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain