Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene37675 SustainPine v2.0 741
• AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
sp_v2.0_unigene37770 SustainPine v2.0 537
• AutoFact: TMV-associated RING finger protein n=1 Tax=Nicotiana tabacum RepID=E0D6T7_TOBAC 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: zinc finger 3.92896e-28
Internal
sp_v2.0_unigene37828 SustainPine v2.0 727
• AutoFact: Bet_v_1 domain containing protein 0.0001
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abscisic acid receptor pyl5-like 0.0
N-terminus
sp_v2.0_unigene37966 SustainPine v2.0 486
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S456_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ankyrin-like protein 0.0
Internal
sp_v2.0_unigene38039 SustainPine v2.0 549
• AutoFact: putative receptor protein kinase [Arabidopsis thaliana] gb|ACN59306.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEC09344.1| putative receptor protein kinase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene38125 SustainPine v2.0 624
• AutoFact: RING-H2 finger protein ATL74 [Arabidopsis thaliana] sp|Q9LZV8.1|ATL74_ARATH RecName: Full=RING-H2 finger protein ATL74 emb|CAB82758.1| putative protein [Arabidopsis thaliana] gb|AAR20739.1| At5g01880 [Arabidopsis thaliana] gb|AAR24751.1| At5g01880 [Arabid 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene38173 SustainPine v2.0 489
• AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 2.0e-34
• FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: at2g22010-like protein 0.0
Internal
sp_v2.0_unigene38439 SustainPine v2.0 439
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 8.38524e-15
N-terminus
sp_v2.0_unigene38457 SustainPine v2.0 421
• AutoFact: putative RING-H2 zinc finger protein ATL3 [Arabidopsis thaliana] 8.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger family protein 1.64949e-33
Internal
sp_v2.0_unigene38465 SustainPine v2.0 487
• AutoFact: pfam00097, zf-C3HC4, Zinc finger, C3HC4 type (RING finger) 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene38492 SustainPine v2.0 528
• AutoFact: hercules receptor kinase 2 [Arabidopsis thaliana] sp|Q9SA72.1|Y1357_ARATH RecName: Full=Probable receptor-like protein kinase At1g30570; Flags: Precursor gb|AAD25744.1|AC007060_2 Contains eukaryotic protein kinase domain PF|00069 [Arabidopsis thaliana] gb 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: feronia-like protein 0.0
Internal
sp_v2.0_unigene38500 SustainPine v2.0 520
• AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
sp_v2.0_unigene38754 SustainPine v2.0 698
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abscisic acid receptor pyl4 0.0
Putative Complete
sp_v2.0_unigene38792 SustainPine v2.0 323
• AutoFact: RING zinc finger protein, putative [Oryza sativa Japonica Group] gb|ABA91504.1| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica Group] dbj|BAH01714.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 1.00406e-14
Internal
sp_v2.0_unigene38994 SustainPine v2.0 615
• AutoFact: C3H4 type zinc finger protein [Arabidopsis thaliana] gb|AEE77301.1| C3H4 type zinc finger protein [Arabidopsis thaliana] 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 1.50712e-35
Putative C-terminus
sp_v2.0_unigene39080 SustainPine v2.0 367
• AutoFact: Zinc finger protein-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7K2_ORYSJ 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: zinc finger protein 6.2626e-31
Internal
sp_v2.0_unigene39129 SustainPine v2.0 316
• AutoFact: Hemerythrin domain containing protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: zinc finger protein 0.0
Internal
sp_v2.0_unigene39319 SustainPine v2.0 427
• AutoFact: pfam12738, PTCB-BRCT, twin BRCT domain 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein ligase zinc ion binding protein 2.73393e-42
N-terminus
sp_v2.0_unigene39472 SustainPine v2.0 418
• AutoFact: protein kinase family protein [Arabidopsis thaliana] dbj|BAB09338.1| serine/threonine-specific protein kinase-like protein [Arabidopsis thaliana] gb|AED96515.1| protein kinase family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable leucine-rich repeat receptor-like serine threonine-protein kinase at5g15730-like 0.0
Internal
sp_v2.0_unigene39473 SustainPine v2.0 363
• AutoFact: WS01041.B21.1_D16 SS-R-N-A-11 Picea sitchensis cDNA clone WS01041_D16 3, mRNA sequence. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase bah1-like 2.53227e-31
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain