Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene35189 SustainPine v2.0 571
• AutoFact: Membrane associated ring finger 1,8, putative n=1 Tax=Ricinus communis RepID=B9S8W6_RICCO 5.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane associated ring finger 8.19023e-22
Complete
sp_v2.0_unigene35243 SustainPine v2.0 525
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAC42417.1| unknown protein [Arabidopsis thaliana] gb|AAP68217.1| At3g05250 [Arabidopsis thaliana] gb|AAZ14063.1| At3g05250 [Arabidopsis thaliana] gb|AEE74211.1| RING/U-box domain-containing 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein binding 3.7602e-37
N-terminus
sp_v2.0_unigene35505 SustainPine v2.0 850
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAC06154.1| expressed protein [Arabidopsis thaliana] gb|AAO00741.1| Unknown protein [Arabidopsis thaliana] gb|AAP13386.1| At2g45530 [Arabidopsis thaliana] gb|AEC10566.1| RING/U-box domain-cont 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene35514 SustainPine v2.0 888
• AutoFact: putative ring-box Roc1/Rbx1/Hrt1 protein [Olimarabidopsis pumila] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-box protein 0.0
Complete
sp_v2.0_unigene35679 SustainPine v2.0 498
• AutoFact: RING-H2 finger protein ATL5 [Arabidopsis thaliana] sp|Q9LZJ6.1|ATL5_ARATH RecName: Full=RING-H2 finger protein ATL5 emb|CAB83119.1| RING-H2 zinc finger protein ATL5 [Arabidopsis thaliana] gb|AAP75799.1| At3g62690 [Arabidopsis thaliana] dbj|BAF00294.1| RIN 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rha1b-like 1.83114e-29
C-terminus
sp_v2.0_unigene35798 SustainPine v2.0 614
• AutoFact: PHD multi-domain protein 3.0e-09
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 4.1058e-43
Internal
sp_v2.0_unigene35850 SustainPine v2.0 588
• AutoFact: COP1 homolog [Solanum lycopersicum] 5.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.4013e-45
Putative C-terminus
sp_v2.0_unigene35910 SustainPine v2.0 1172
• AutoFact: Carbon catabolite repressor protein 4 homolog 5 n=2 Tax=Arabidopsis RepID=CCR4E_ARATH 0.0
• FL-Next: sp=Carbon catabolite repressor protein 4 homolog 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: carbon catabolite repressor protein 4-like 3 0.0
C-terminus
sp_v2.0_unigene35932 SustainPine v2.0 971
• AutoFact: E3 ubiquitin ligase-like protein [Arabidopsis thaliana] gb|AAM91555.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAN15327.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD43976.1| unknown protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: e3 ubiquitin ligase-like protein 0.0
N-terminus
sp_v2.0_unigene36059 SustainPine v2.0 471
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
Internal
sp_v2.0_unigene36065 SustainPine v2.0 550
• AutoFact: RING protein n=1 Tax=Elaeis guineensis RepID=E3SER9_ELAGV 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v2.0_unigene36090 SustainPine v2.0 750
• AutoFact: Ssm4 protein, putative n=1 Tax=Ricinus communis RepID=B9RYE5_RICCO 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene36260 SustainPine v2.0 973
• AutoFact: RING-H2 finger protein ATL74 [Arabidopsis thaliana] sp|Q9LZV8.1|ATL74_ARATH RecName: Full=RING-H2 finger protein ATL74 emb|CAB82758.1| putative protein [Arabidopsis thaliana] gb|AAR20739.1| At5g01880 [Arabidopsis thaliana] gb|AAR24751.1| At5g01880 [Arabid 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene36605 SustainPine v2.0 789
• AutoFact: E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana] sp|Q9FY48.2|KEG_ARATH RecName: Full=E3 ubiquitin-protein ligase KEG; AltName: Full=Protein KEEP ON GOING; AltName: Full=RING finger protein KEG gb|ABC46683.1| RING E3 ligase protein [Arabidopsis thali 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: at5g13530-like protein 0.0
Internal
sp_v2.0_unigene36952 SustainPine v2.0 703
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RCF4_RICCO 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rha1b-like 0.0
Complete
sp_v2.0_unigene36981 SustainPine v2.0 419
• AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74) 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein spa1-related 2-like 1.4638e-41
N-terminus
sp_v2.0_unigene37281 SustainPine v2.0 213
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v2.0_unigene37391 SustainPine v2.0 625
• AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein atl72-like 5.99576e-39
C-terminus
sp_v2.0_unigene37431 SustainPine v2.0 516
• AutoFact: PREDICTED: similar to SNF2 histone linker PHD RING helicase [Gallus gallus] 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase shprh-like 3.14989e-37
Internal
sp_v2.0_unigene37591 SustainPine v2.0 479
• AutoFact: Protein translocase subunit secA n=1 Tax=Ricinus communis RepID=B9RN40_RICCO 0.0
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein translocase subunit chloroplastic-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain