Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene31400 SustainPine v2.0 611
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v2.0_unigene31418 SustainPine v2.0 440
AutoFact: E3 ubiquitin ligase-like protein [Arabidopsis thaliana] gb|AAM91555.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAN15327.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD43976.1| unknown protein [Arabidopsis thaliana] 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: e3 ubiquitin ligase-like protein 5.70647e-32
Putative N-terminus
sp_v2.0_unigene31696 SustainPine v2.0 778
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TQ32_VITVI 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hydroxyproline-rich glycoprotein family protein 3.22536e-32
Internal
sp_v2.0_unigene31699 SustainPine v2.0 504
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 8.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 1.30938e-16
N-terminus
sp_v2.0_unigene31899 SustainPine v2.0 429
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Internal
sp_v2.0_unigene31919 SustainPine v2.0 412
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 1.4135e-37
Internal
sp_v2.0_unigene32041 SustainPine v2.0 361
AutoFact: Lectin-like receptor kinase 7 n=2 Tax=Andropogoneae RepID=B6SWU9_MAIZE 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
sp_v2.0_unigene32202 SustainPine v2.0 483
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AEE86323.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 1.32314e-29
N-terminus
sp_v2.0_unigene32206 SustainPine v2.0 676
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat protein kinase-like protein 0.0
C-terminus
sp_v2.0_unigene32247 SustainPine v2.0 610
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g74600-like protein 0.0
Internal
sp_v2.0_unigene32264 SustainPine v2.0 350
AutoFact: DUF729 domain containing protein 0.0001
unknown
sp_v2.0_unigene32416 SustainPine v2.0 646
AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 7.0e-34
FL-Next: sp=RING-H2 finger protein ATL72; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ring-h2 finger protein 0.0
Complete
sp_v2.0_unigene32453 SustainPine v2.0 427
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna-binding protein chloroplast 2.2701e-43
Internal
sp_v2.0_unigene32545 SustainPine v2.0 321
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 9.0e-10
FL-Next: tr=Transcription factor, putative; Ricinus communis (Castor bean). 0.0
Blast2go: transcription factor jumonji domain-containing protein 2.46446e-11
Internal
sp_v2.0_unigene32666 SustainPine v2.0 898
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger 0.0
Putative Complete
sp_v2.0_unigene32818 SustainPine v2.0 1847
AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2-like 0.0
Complete
sp_v2.0_unigene32949 SustainPine v2.0 438
AutoFact: RVT_2 domain containing protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_027864 [Vitis vinifera] 1.65073e-42
Putative C-terminus
sp_v2.0_unigene32976 SustainPine v2.0 492
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Internal
sp_v2.0_unigene33044 SustainPine v2.0 549
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 4.53608e-27
N-terminus
sp_v2.0_unigene33139 SustainPine v2.0 675
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] dbj|BAB11496.1| unnamed protein product [Arabidopsis thaliana] gb|AAL31206.1| AT5g62460/K19B1_7 [Arabidopsis thaliana] gb|AAM98316.1| At5g62460/K19B1_7 [Arabidopsis thaliana] gb|AED97609. 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 7.16729e-22
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain