Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene11273 SustainPine v2.0 987
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] dbj|BAB11496.1| unnamed protein product [Arabidopsis thaliana] gb|AAL31206.1| AT5g62460/K19B1_7 [Arabidopsis thaliana] gb|AAM98316.1| At5g62460/K19B1_7 [Arabidopsis thaliana] gb|AED97609. 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring fyve phd zinc finger-containing protein 1.89876e-42
Complete
sp_v2.0_unigene11388 SustainPine v2.0 695
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.11636e-15
C-terminus
sp_v2.0_unigene11644 SustainPine v2.0 2111
• AutoFact: Transmembrane Fragile-X-F-associated protein [Arabidopsis thaliana] gb|AEE35529.1| Transmembrane Fragile-X-F-associated protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transmembrane fragile-x-f-associated protein 0.0
Complete
sp_v2.0_unigene11804 SustainPine v2.0 1471
• AutoFact: pfam07002, Copine, Copine 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rglg2 0.0
Putative N-terminus
sp_v2.0_unigene11906 SustainPine v2.0 1285
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger (c3hc4-type ring finger) 0.0
Complete
sp_v2.0_unigene11924 SustainPine v2.0 666
• AutoFact: C3HC4-type RING finger-containing protein [Arabidopsis thaliana] gb|AEC09620.1| C3HC4-type RING finger-containing protein [Arabidopsis thaliana] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Internal
sp_v2.0_unigene11973 SustainPine v2.0 895
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene12070 SustainPine v2.0 1471
• AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein spa1-related 3-like 0.0
Complete
sp_v2.0_unigene12081 SustainPine v2.0 557
• AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Ostreococcus lucimarinus (strain CCE9901). 0.0
• Blast2go: preprotein translocase seca-like protein 0.0
Putative N-terminus
sp_v2.0_unigene12208 SustainPine v2.0 536
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAC42311.1| unknown protein [Arabidopsis thaliana] dbj|BAD95088.1| hypothetical protein [Arabidopsis thaliana] dbj|BAD93876.1| hypothetical protein [Arabidopsis thaliana] gb|AED91256.1| RING/ 8.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.31803e-23
Internal
sp_v2.0_unigene12280 SustainPine v2.0 447
• AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
• FL-Next: sp=Protein translocase subunit SecA; Phaeodactylum tricornutum (strain CCAP 1055/1). Plastid; Chloroplast. 0.0
• Blast2go: preprotein translocase seca-like protein 0.0
Putative C-terminus
sp_v2.0_unigene12311 SustainPine v2.0 488
• AutoFact: Receptor-like protein kinase (Fragment) n=1 Tax=Glycine max RepID=Q9SEW3_SOYBN 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
sp_v2.0_unigene12344 SustainPine v2.0 866
• AutoFact: DEA(D/H)-box RNA helicase family protein n=5 Tax=Arabidopsis RepID=F4IM84_ARATH 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable atp-dependent rna helicase dhx36-like 0.0
Internal
sp_v2.0_unigene12421 SustainPine v2.0 993
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein loc100258626 0.0
Putative Complete
sp_v2.0_unigene12476 SustainPine v2.0 1099
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGV0.1|Y5487_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g48740; Flags: Precursor gb|ACN59385.1| leucine-rich repeat receptor-like 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lrr receptor-like serine threonine-protein kinase 0.0
Internal
sp_v2.0_unigene12485 SustainPine v2.0 998
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 0.0
C-terminus
sp_v2.0_unigene12622 SustainPine v2.0 471
• AutoFact: Os07g0575600 protein n=2 Tax=Oryza sativa RepID=Q8LIP2_ORYSJ 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
sp_v2.0_unigene12742 SustainPine v2.0 1879
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_973461.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11603.1|AF424609_1 unknown protein [Arabidopsis thaliana] gb|AAM15000.1| Expressed protein [Arabidopsis thaliana 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene13147 SustainPine v2.0 798
• AutoFact: RING-box protein 1a n=7 Tax=rosids RepID=RBX1A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-box protein 0.0
Complete
sp_v2.0_unigene13292 SustainPine v2.0 790
• AutoFact: F21M11.4 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZWC2_ARATH 3.0e-26
• FL-Next: sp=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein breast cancer susceptibility 1 homolog 8.6907e-32
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain