Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ubiquitin

Term: IPR000626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene5817 SustainPine v2.0 1531
AutoFact: Ubiquitin, putative n=1 Tax=Ricinus communis RepID=B9RSH8_RICCO 0.0
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphoinositide 4-kinase gamma 4 0.0
Putative C-terminus
sp_v2.0_unigene6184 SustainPine v2.0 1189
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like family protein 0.0
Complete
sp_v2.0_unigene7691 SustainPine v2.0 1115
AutoFact: Polyubiquitin n=2 Tax=Chlorophyta RepID=D8U995_VOLCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 2 0.0
Complete
sp_v2.0_unigene7913 SustainPine v2.0 1611
AutoFact: Actin related protein 2 n=1 Tax=Selaginella moellendorffii RepID=D8S0E5_SELML 0.0
FL-Next: tr=Actin 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: actin related protein 2 0.0
Putative Complete
sp_v2.0_unigene8185 SustainPine v2.0 1606
AutoFact: polyubiquitin 4 [Arabidopsis thaliana] ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp. lyrata] sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA31331.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 0.0
Putative Complete
sp_v2.0_unigene8692 SustainPine v2.0 699
AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin 7.0e-20
FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5-like 0.0
Internal
sp_v2.0_unigene9425 SustainPine v2.0 724
AutoFact: Actin-75 n=1 Tax=Solanum tuberosum RepID=ACT7_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene9898 SustainPine v2.0 2210
AutoFact: DNA damage-inducible protein 1 [Arabidopsis thaliana] ref|NP_001189877.1| DNA damage-inducible protein 1 [Arabidopsis thaliana] gb|ABG25069.1| At3g13235 [Arabidopsis thaliana] dbj|BAE98897.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75323.1| DNA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna damage-inducible protein 1 0.0
Complete
sp_v2.0_unigene9950 SustainPine v2.0 1190
AutoFact: Rtf2 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene10447 SustainPine v2.0 1139
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9S2Y0_RICCO 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 26; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 26-like 0.0
N-terminus
sp_v2.0_unigene10520 SustainPine v2.0 948
AutoFact: [O] COG5272 Ubiquitin 1.0e-14
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phosphoinositide 4-kinase gamma 4 5.60519e-44
N-terminus
sp_v2.0_unigene10637 SustainPine v2.0 1596
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Complete
sp_v2.0_unigene10813 SustainPine v2.0 1464
AutoFact: Membrane-anchored ubiquitin-fold protein 3 n=5 Tax=Poaceae RepID=MUB3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene10893 SustainPine v2.0 2375
AutoFact: Plant ubiquilin, putative n=1 Tax=Ricinus communis RepID=B9S6T7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 0.0
Complete
sp_v2.0_unigene11355 SustainPine v2.0 3633
AutoFact: ubiquitin family protein [Arabidopsis thaliana] gb|AAM98085.1| AT5g42220/K5J14_2 [Arabidopsis thaliana] gb|AAP21172.1| AT5g42220/K5J14_2 [Arabidopsis thaliana] gb|AED94781.1| ubiquitin family protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene11842 SustainPine v2.0 2361
AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAY34175.1| At2g12550 [Arabidopsis thaliana] gb|AEC06204.1| ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ubiquitin-associated ts-n domain-containing protein 0.0
Complete
sp_v2.0_unigene11880 SustainPine v2.0 3052
AutoFact: putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza sativa Japonica Group] gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group] 0.0
FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: pre-mrna splicing factor 0.0
Complete
sp_v2.0_unigene12298 SustainPine v2.0 455
AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SU81_VITVI 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 26-like 0.0
Internal
sp_v2.0_unigene12478 SustainPine v2.0 1937
AutoFact: Phosphatidylinositol 3-and 4-kinase, catalytic n=1 Tax=Medicago truncatula RepID=A2Q630_MEDTR 0.0
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphatidylinositol 3-and 4-kinase family protein 0.0
C-terminus
sp_v2.0_unigene13736 SustainPine v2.0 1036
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 4.0e-30
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 7.82079e-30
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain