Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ubiquitin

Term: IPR000626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene76898 SustainPine v2.0 913
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Picea sitchensis RepID=A9NUT3_PICSI 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 6 0.0
Internal
sp_v2.0_unigene78392 SustainPine v2.0 393
AutoFact: DNA-damage inducible protein DDI1-like [Arabidopsis thaliana] 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna damage-inducible protein 1-like 3.97078e-12
C-terminus
sp_v2.0_unigene78427 SustainPine v2.0 396
AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9S3I1_RICCO 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 1.60463e-32
Internal
sp_v2.0_unigene78630 SustainPine v2.0 763
AutoFact: Actin, putative n=1 Tax=Ricinus communis RepID=B9SXZ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin 0.0
C-terminus
sp_v2.0_unigene79523 SustainPine v2.0 800
AutoFact: Ubiquitin n=2 Tax=Dictyosteliida RepID=D3AVZ4_POLPA 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 3.02921e-31
Complete
sp_v2.0_unigene80219 SustainPine v2.0 366
AutoFact: 60S ribosomal protein L40 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KFB8_PUCGT 5.0e-16
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: multidrug resistance protein abc transporter family 6.89821e-20
Complete
sp_v2.0_unigene80305 SustainPine v2.0 639
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Blast2go: actin 0.0
Internal
sp_v2.0_unigene80315 SustainPine v2.0 529
AutoFact: Actin (Fragment) n=4 Tax=Spermatophyta RepID=ACT_PINCO 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: actin 0.0
Complete
sp_v2.0_unigene80361 SustainPine v2.0 383
AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 9 8.75533e-30
C-terminus
sp_v2.0_unigene81298 SustainPine v2.0 518
AutoFact: Actin, putative n=2 Tax=core eudicotyledons RepID=B9SXZ5_RICCO 0.0
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: actin 0.0
N-terminus
sp_v2.0_unigene81988 SustainPine v2.0 476
AutoFact: [O] COG5272 Ubiquitin 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: neural precursor cell developmentally down-regulated 8 3.21036e-14
Putative Complete
sp_v2.0_unigene82249 SustainPine v2.0 609
AutoFact: PREDICTED: similar to Actin, alpha skeletal muscle (Alpha-actin 1) isoform 4 [Canis familiaris] 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Blast2go: actin 0.0
Putative C-terminus
sp_v2.0_unigene82354 SustainPine v2.0 730
AutoFact: Actin, gamma, cytoplasmic 1 n=12 Tax=Fungi/Metazoa group RepID=B1ATY1_MOUSE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin 0.0
Putative Complete
sp_v2.0_unigene82373 SustainPine v2.0 430
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin 0.0
Putative C-terminus
sp_v2.0_unigene83815 SustainPine v2.0 492
AutoFact: [O] COG5272 Ubiquitin 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiqutin 1 5.76062e-29
Putative Complete
sp_v2.0_unigene83817 SustainPine v2.0 396
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 1.0e-38
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: ubiquitin 13 5.89484e-39
Putative N-terminus
sp_v2.0_unigene83819 SustainPine v2.0 547
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
sp_v2.0_unigene83820 SustainPine v2.0 391
AutoFact: [O] COG5272 Ubiquitin 3.0e-16
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 2.83548e-20
C-terminus
sp_v2.0_unigene83821 SustainPine v2.0 196
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-22
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative C-terminus
sp_v2.0_unigene83822 SustainPine v2.0 355
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 4.04456e-35
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain