Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein S12/S23

Term: IPR006032  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene78812 SustainPine v2.0 557
AutoFact: ethylene-responsive transcription factor ERF016 [Arabidopsis thaliana] sp|Q9C591.1|ERF16_ARATH RecName: Full=Ethylene-responsive transcription factor ERF016 emb|CAC34489.1| putative protein [Arabidopsis thaliana] gb|AAO73898.1| AP2 domain transcription fa 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
N-terminus
sp_v2.0_unigene78910 SustainPine v2.0 522
AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene79084 SustainPine v2.0 317
AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s23 3.68378e-28
N-terminus
sp_v2.0_unigene79347 SustainPine v2.0 341
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9IKF6_POPTR 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 7.4118e-13
N-terminus
sp_v2.0_unigene79383 SustainPine v2.0 436
AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 2.85072e-35
N-terminus
sp_v2.0_unigene85796 SustainPine v2.0 634
AutoFact: auxin response factor 4 [Solanum lycopersicum] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 4 0.0
C-terminus
sp_v2.0_unigene86118 SustainPine v2.0 445
AutoFact: Putative auxin response factor 2 n=1 Tax=Amborella trichopoda RepID=E0WD83_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor-like protein 0.0
Internal
sp_v2.0_unigene91517 SustainPine v2.0 404
AutoFact: Auxin response factor 23 n=6 Tax=Oryza sativa RepID=ARFW_ORYSJ 7.0e-15
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor expressed 5.10432e-17
Internal
sp_v2.0_unigene91608 SustainPine v2.0 200
AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 domain transcription factor-like 4.184e-28
N-terminus
sp_v2.0_unigene91656 SustainPine v2.0 1034
AutoFact: auxin response factor 5 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arf4 protein 0.0
Internal
sp_v2.0_unigene91702 SustainPine v2.0 442
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain