Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein S12/S23

Term: IPR006032  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene19083 SustainPine v2.0 1105
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response 0.0
Putative N-terminus
sp_v2.0_unigene20609 SustainPine v2.0 459
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z0_MALDO 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 5.0498e-22
N-terminus
sp_v2.0_unigene21059 SustainPine v2.0 395
AutoFact: putative MAP4 kinase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
sp_v2.0_unigene22180 SustainPine v2.0 782
AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor erf017 0.0
Putative Complete
sp_v2.0_unigene22218 SustainPine v2.0 380
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA4_POPTR 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 3.0136e-40
N-terminus
sp_v2.0_unigene25095 SustainPine v2.0 528
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tiny transcription factor 6.50751e-26
C-terminus
sp_v2.0_unigene25129 SustainPine v2.0 730
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
sp_v2.0_unigene25893 SustainPine v2.0 1048
AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SC17_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative C-terminus
sp_v2.0_unigene26140 SustainPine v2.0 1595
AutoFact: DUF1336 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipid binding 0.0
C-terminus
sp_v2.0_unigene27008 SustainPine v2.0 984
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Complete
sp_v2.0_unigene27236 SustainPine v2.0 3650
AutoFact: ARF-L2 protein (Fragment) n=1 Tax=Ginkgo biloba RepID=D4HTT9_GINBI 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 2 0.0
Complete
sp_v2.0_unigene27242 SustainPine v2.0 781
AutoFact: Auxin response factor-like protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBL7_CUCME 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor-like protein 1.28782e-15
Putative N-terminus
sp_v2.0_unigene27355 SustainPine v2.0 1715
AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor-like protein 0.0
N-terminus
sp_v2.0_unigene27376 SustainPine v2.0 1178
AutoFact: WS0349.C21_P18 WS-SE-N-A-19 Picea glauca cDNA clone WS0349_P18 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: somatic embryogenesis receptor kinase 1.82315e-31
Putative N-terminus
sp_v2.0_unigene27480 SustainPine v2.0 560
AutoFact: UDP-glucose:salicylic acid glucosyltransferase [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene27592 SustainPine v2.0 863
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RQZ6_RICCO 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Complete
sp_v2.0_unigene27620 SustainPine v2.0 509
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RR65_RICCO 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene27724 SustainPine v2.0 1415
AutoFact: protein kinase family protein [Musa balbisiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase family protein 0.0
C-terminus
sp_v2.0_unigene29443 SustainPine v2.0 803
AutoFact: auxin response factor 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: arf4 protein 0.0
Internal
sp_v2.0_unigene30363 SustainPine v2.0 1960
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 6-like 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain