Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA ligase, ATP-dependent, conserved site

Term: IPR016059  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene94 SustainPine v2.0 1430
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
N-terminus
sp_v2.0_unigene925 SustainPine v2.0 1306
AutoFact: WS02760.CR_M13 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02760_M13 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein kiaa0664 homolog 0.0
Internal
sp_v2.0_unigene1176 SustainPine v2.0 2593
AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
FL-Next: sp=Ethylene-responsive transcription factor 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 7.20587e-20
Complete
sp_v2.0_unigene1349 SustainPine v2.0 2302
AutoFact: Ethylene response factor 1 n=1 Tax=Cucumis sativus RepID=Q5S004_CUCSA 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 1.6707e-15
Complete
sp_v2.0_unigene2018 SustainPine v2.0 1977
AutoFact: DNA ligase n=5 Tax=Poaceae RepID=Q7XD67_ORYSJ 0.0
FL-Next: sp=DNA ligase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 0.0
C-terminus
sp_v2.0_unigene2361 SustainPine v2.0 1943
AutoFact: WS0273.BR_I01 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS0273_I01 3, mRNA sequence. 0.0
FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene2926 SustainPine v2.0 3231
AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Complete
sp_v2.0_unigene3054 SustainPine v2.0 1394
AutoFact: hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] gb|AAK25929.1|AF360219_1 putative lipase [Arabidopsis thaliana] gb|AAK93696.1| putative lipase [Arabidopsis thaliana] gb|AED92248.1| hydrolase, alpha/beta fold family protein [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha beta fold family protein 0.0
Complete
sp_v2.0_unigene3391 SustainPine v2.0 3067
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9RHH9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat -containing protein 0.0
Complete
sp_v2.0_unigene4094 SustainPine v2.0 347
AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4HS99_ARATH 5.0e-25
FL-Next: tr=Tetratricopeptide repeat-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: tetratricopeptide repeat-containing protein 4.33558e-30
Internal
sp_v2.0_unigene4853 SustainPine v2.0 1774
AutoFact: FAP multi-domain protein 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.35504e-29
Putative Complete
sp_v2.0_unigene4973 SustainPine v2.0 935
AutoFact: RecName: Full=Cyclin-T1-3; Short=CycT1;3 gb|AAX92940.1| Cyclin, N-terminal domain, putative [Oryza sativa Japonica Group] gb|EEC67709.1| hypothetical protein OsI_35185 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-t1-5-like isoform 1 0.0
N-terminus
sp_v2.0_unigene4991 SustainPine v2.0 636
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 0.0
Internal
sp_v2.0_unigene5264 SustainPine v2.0 2508
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80-like 0.0
Complete
sp_v2.0_unigene5633 SustainPine v2.0 2203
AutoFact: allantoinase [Robinia pseudoacacia] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: probable allantoinase 1-like 0.0
Complete
sp_v2.0_unigene5637 SustainPine v2.0 1472
AutoFact: DNA helicase recq1, putative n=1 Tax=Ricinus communis RepID=B9S1J8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase q-like 2 0.0
C-terminus
sp_v2.0_unigene5932 SustainPine v2.0 1149
AutoFact: PsbP domain containing protein 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: psbp domain-containing protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene6040 SustainPine v2.0 957
AutoFact: Ethylene-responsive element binding factor-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZDA4_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 0.0
Complete
sp_v2.0_unigene6490 SustainPine v2.0 2369
AutoFact: Isopimaradiene synthase, chloroplastic n=6 Tax=Picea RepID=TPSD2_PICAB 0.0
FL-Next: tr=Levopimaradiene/abietadiene synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Putative C-terminus
sp_v2.0_unigene6530 SustainPine v2.0 1396
AutoFact: ERF transcription factor n=1 Tax=Solanum tuberosum RepID=A4ZX83_SOLTU 1.0e-27
FL-Next: sp=Ethylene-responsive transcription factor 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain