Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA ligase, ATP-dependent, conserved site

Term: IPR016059  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene43298 SustainPine v2.0 334
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 4.0e-33
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 1.7119e-39
Internal
sp_v2.0_unigene44713 SustainPine v2.0 569
AutoFact: WS02759.CR_M10 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02759_M10 3', mRNA sequence. 2.0e-22
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein kiaa0664 homolog 5.03744e-18
Putative Complete
sp_v2.0_unigene46403 SustainPine v2.0 857
AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 0.0
FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 0.0
Complete
sp_v2.0_unigene46819 SustainPine v2.0 299
AutoFact: CHD3-type chromatin-remodeling factor PICKLE n=2 Tax=Arabidopsis RepID=PKL_ARATH 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene50544 SustainPine v2.0 778
AutoFact: Abietadiene synthase, chloroplastic n=1 Tax=Abies grandis RepID=TPSDV_ABIGR 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Internal
sp_v2.0_unigene50972 SustainPine v2.0 247
AutoFact: Unassigned protein
FL-Next: sp=Inactive poly [ADP-ribose] polymerase RCD1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: poly polymerase catalytic domain containing expressed 1.76379e-23
Internal
sp_v2.0_unigene54663 SustainPine v2.0 392
AutoFact: DNA ligase n=1 Tax=Oryza sativa Japonica Group RepID=B9EYN2_ORYSJ 2.0e-15
FL-Next: sp=DNA ligase; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: uncharacterized protein loc100835014 3.65668e-15
Internal
sp_v2.0_unigene55030 SustainPine v2.0 780
AutoFact: DNA ligase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TSX4_VITVI 0.0
FL-Next: sp=DNA ligase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 0.0
Internal
sp_v2.0_unigene60237 SustainPine v2.0 1321
AutoFact: alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAL15341.1| At2g47630/F17A22.2 [Arabidopsis thaliana] gb|AAM14848.1| putative phospholipase [Arabidopsis thaliana] gb|AAC63619.2| putative phospholipase [Arabidopsis thaliana] gb|AAM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: esterase lipase thioesterase family protein 0.0
Complete
sp_v2.0_unigene60633 SustainPine v2.0 263
AutoFact: ERF transcription factor 4 n=1 Tax=Vitis pseudoreticulata RepID=D3Y3F3_9ROSI 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1.09049e-25
Internal
sp_v2.0_unigene61416 SustainPine v2.0 1056
AutoFact: putative phospholipase [Arabidopsis thaliana] gb|AAC27833.1| putative phospholipase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: esterase lipase thioesterase family protein 0.0
Putative Complete
sp_v2.0_unigene62067 SustainPine v2.0 723
AutoFact: putative phospholipase [Arabidopsis thaliana] gb|AAC27833.1| putative phospholipase [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: esterase lipase thioesterase family protein 0.0
C-terminus
sp_v2.0_unigene62880 SustainPine v2.0 427
AutoFact: pfam12697, Abhydrolase_6, Alpha/beta hydrolase family 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: monoglyceride lipase 1.47136e-43
Internal
sp_v2.0_unigene63541 SustainPine v2.0 1688
AutoFact: Isopimaradiene synthase, chloroplastic n=6 Tax=Picea RepID=TPSD2_PICAB 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene64428 SustainPine v2.0 430
AutoFact: Ethylene-responsive element-binding protein n=1 Tax=Medicago truncatula RepID=Q2I2S8_MEDTR 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 5.90335e-32
N-terminus
sp_v2.0_unigene64554 SustainPine v2.0 941
AutoFact: Alpha/beta-hydrolase domain-containing protein n=3 Tax=Arabidopsis RepID=Q8RXN7_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: esterase lipase thioesterase family protein 0.0
N-terminus
sp_v2.0_unigene64560 SustainPine v2.0 544
AutoFact: ERF transcription factor 2 n=5 Tax=Vitis RepID=D3Y3F1_9ROSI 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 5-like 0.0
Putative C-terminus
sp_v2.0_unigene65293 SustainPine v2.0 339
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.35434e-18
Putative C-terminus
sp_v2.0_unigene65582 SustainPine v2.0 420
AutoFact: AP2-related transcription factor n=1 Tax=Mesembryanthemum crystallinum RepID=Q9M4Y9_MESCR 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 1.43459e-37
Internal
sp_v2.0_unigene65627 SustainPine v2.0 304
AutoFact: Ethylene-responsive element binding factor 4 n=1 Tax=Glycine max RepID=B3VHW0_SOYBN 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene response factor 3 1.19202e-17
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain