Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA ligase, ATP-dependent, conserved site

Term: IPR016059  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6549 SustainPine v2.0 1947
AutoFact: Alpha-bisabolene synthase n=1 Tax=Abies grandis RepID=TPSD1_ABIGR 0.0
FL-Next: sp=Alpha-bisabolene synthase; Abies grandis (Grand fir). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene7142 SustainPine v2.0 861
AutoFact: histidine kinase-like ATPase domain-containing protein [Arabidopsis thaliana] gb|AEE84983.1| histidine kinase-like ATPase domain-containing protein [Arabidopsis thaliana] 7.0e-19
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 5.41334e-21
Putative N-terminus
sp_v2.0_unigene7446 SustainPine v2.0 2868
AutoFact: Isopimaradiene synthase, chloroplastic n=6 Tax=Picea RepID=TPSD2_PICAB 0.0
FL-Next: sp=Isopimaradiene synthase, chloroplastic; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Complete
sp_v2.0_unigene7475 SustainPine v2.0 1101
AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 4.2039e-45
FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 0.0
Complete
sp_v2.0_unigene7496 SustainPine v2.0 1111
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100809777 3.36312e-44
C-terminus
sp_v2.0_unigene7511 SustainPine v2.0 1254
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat domain-containing protein 2.8026e-45
C-terminus
sp_v2.0_unigene7520 SustainPine v2.0 1511
AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
Complete
sp_v2.0_unigene7540 SustainPine v2.0 1647
AutoFact: Transcription factor AP2-EREBP n=1 Tax=Lotus japonicus RepID=B3IX32_LOTJA 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
Complete
sp_v2.0_unigene8720 SustainPine v2.0 931
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Putative N-terminus
sp_v2.0_unigene8811 SustainPine v2.0 1076
AutoFact: Tetratricopeptide repeat domain protein n=2 Tax=Arabidopsis RepID=F4JKH6_ARATH 0.0
FL-Next: tr=Eukaryotic translation initiation factor 3 subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein kiaa0664 homolog 0.0
Internal
sp_v2.0_unigene8845 SustainPine v2.0 1976
AutoFact: Cyclin-L1, putative n=1 Tax=Ricinus communis RepID=B9RTZ2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin t1 0.0
Putative Complete
sp_v2.0_unigene10769 SustainPine v2.0 1567
AutoFact: serine/threonine-prot (ISS) [Ostreococcus tauri] emb|CAL57156.1| serine/threonine-prot (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: mitotic checkpoint serine threonine-protein kinase bub1-like 0.0
Putative Complete
sp_v2.0_unigene11526 SustainPine v2.0 1401
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L102_MALDO 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 1.14863e-21
Complete
sp_v2.0_unigene11793 SustainPine v2.0 616
AutoFact: ERF protein n=1 Tax=Glycine max RepID=D9IXB2_SOYBN 6.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 5-like 0.0
Putative C-terminus
sp_v2.0_unigene11950 SustainPine v2.0 612
AutoFact: pfam12807, eIF3_p135, Translation initiation factor eIF3 subunit 135 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein kiaa0664 homolog 0.0
Internal
sp_v2.0_unigene14090 SustainPine v2.0 1466
AutoFact: FAP multi-domain protein 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100809777 7.79977e-41
Complete
sp_v2.0_unigene14354 SustainPine v2.0 339
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9HGP8_POPTR 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 5.84174e-24
Putative N-terminus
sp_v2.0_unigene14477 SustainPine v2.0 2095
AutoFact: pfam00168, C2, C2 domain 9.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene14530 SustainPine v2.0 564
AutoFact: Ethylene responsive element binding protein C4 n=2 Tax=Capsicum annuum RepID=Q32W72_CAPAN 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: erf2 transcription factor 4.4167e-40
C-terminus
sp_v2.0_unigene14749 SustainPine v2.0 409
AutoFact: DNA ligase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TSX4_VITVI 7.0e-28
FL-Next: sp=DNA ligase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 1.80942e-34
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain