Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: ABC-2 type transporter

Term: IPR013525  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene72874 SustainPine v2.0 331
AutoFact: ABC transporter-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZJK5_PICSI 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter-like protein 1.30461e-18
C-terminus
sp_v2.0_unigene74463 SustainPine v2.0 383
AutoFact: ABC transporter family, pleiotropic drug resistance protein n=1 Tax=Populus trichocarpa RepID=B9GGM3_POPTR 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 5.87144e-43
Putative C-terminus
sp_v2.0_unigene74923 SustainPine v2.0 332
AutoFact: ABC-2 type transporter family protein [Arabidopsis thaliana] gb|AEE75312.1| ABC-2 type transporter family protein [Arabidopsis thaliana] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 26-like 1.48407e-21
Internal
sp_v2.0_unigene75175 SustainPine v2.0 279
AutoFact: RecName: Full=Pleiotropic drug resistance protein 3; AltName: Full=NtPDR3 emb|CAH39853.1| PDR-like ABC transporter [Nicotiana tabacum] 4.0e-23
FL-Next: sp=Pleiotropic drug resistance protein 3; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: atp-binding cassette transporter 3.88087e-29
Internal
sp_v2.0_unigene75342 SustainPine v2.0 327
AutoFact: ABC transporter G family member 29 n=4 Tax=Arabidopsis RepID=AB29G_ARATH 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 29 1.85556e-39
Putative N-terminus
sp_v2.0_unigene76483 SustainPine v2.0 349
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.75755e-19
C-terminus
sp_v2.0_unigene77071 SustainPine v2.0 625
AutoFact: Pollen specific protein sf21, putative n=1 Tax=Ricinus communis RepID=B9RKB0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pollen specific protein 0.0
Internal
sp_v2.0_unigene77231 SustainPine v2.0 517
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 1.4013e-45
N-terminus
sp_v2.0_unigene78790 SustainPine v2.0 435
AutoFact: Os08g0384500 protein (Fragment) n=5 Tax=Oryza sativa RepID=Q0J5Z9_ORYSJ 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pleiotropic drug resistance protein 1-like 4.2039e-45
Internal
sp_v2.0_unigene80460 SustainPine v2.0 727
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RJZ6_RICCO 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pleiotropic drug resistance protein 9.88224e-14
Internal
sp_v2.0_unigene82347 SustainPine v2.0 1164
AutoFact: Probable pleiotropic drug resistance protein 1 n=6 Tax=Oryza sativa RepID=PDR1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pdr-like abc transporter 0.0
C-terminus
sp_v2.0_unigene82435 SustainPine v2.0 271
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RGL9_RICCO 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette 3.79195e-17
Internal
sp_v2.0_unigene82485 SustainPine v2.0 1278
AutoFact: PDR-like ABC-transporter n=1 Tax=Glycine max RepID=Q1M2R7_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pleiotropic drug resistance protein 0.0
C-terminus
sp_v2.0_unigene82524 SustainPine v2.0 1580
AutoFact: Pleiotropic drug resistance protein 3 n=4 Tax=Oryza sativa RepID=PDR3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pdr-like abc transporter 0.0
Putative Complete
sp_v2.0_unigene82551 SustainPine v2.0 450
AutoFact: PDR-like ABC transporter [Oryza sativa Japonica Group] gb|EAZ12644.1| hypothetical protein OsJ_02558 [Oryza sativa Japonica Group] 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pleiotropic drug resistance protein 1-like 4.56316e-28
Internal
sp_v2.0_unigene82557 SustainPine v2.0 433
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SMW0_RICCO 6.0e-18
FL-Next: tr=ATP-binding cassette transporter, putative; Ricinus communis (Castor bean). 0.0
Blast2go: pleiotropic drug resistance protein 1.15291e-17
Internal
sp_v2.0_unigene82577 SustainPine v2.0 693
AutoFact: PDR-like ABC transporter n=3 Tax=Oryza sativa Japonica Group RepID=Q8GU84_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette 0.0
Putative C-terminus
sp_v2.0_unigene83354 SustainPine v2.0 538
AutoFact: Gag-pol polyprotein, putative [Solanum demissum] 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Putative C-terminus
sp_v2.0_unigene83872 SustainPine v2.0 619
AutoFact: Pleiotropic drug resistance, ABC transporter family protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GL02_POPTR 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette 1.37079e-15
Internal
sp_v2.0_unigene83873 SustainPine v2.0 497
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SRE5_RICCO 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette 4.6991e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain