Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Cyclic nucleotide-binding, conserved site

Term: IPR018488  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene39342 SustainPine v2.0 425
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9LD37.1|CNG20_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; AltName: Full=Cyclic nucleotide-binding transporter 1; Flags: Precursor gb|AAF73128.1|AF148541_1 c 6.0e-22
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 6.66029e-32
Internal
sp_v2.0_unigene41472 SustainPine v2.0 467
AutoFact: Potassium channel GORK n=1 Tax=Arabidopsis thaliana RepID=GORK_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel skor 0.0
Internal
sp_v2.0_unigene43153 SustainPine v2.0 461
AutoFact: Multidrug resistance-associated protein MRP1 (Fragment) n=1 Tax=Triticum aestivum RepID=Q8LGN7_WHEAT 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 5-like 0.0
Putative C-terminus
sp_v2.0_unigene43344 SustainPine v2.0 369
AutoFact: Putative multidrug resistance-associated protein 7 n=2 Tax=Oryza sativa Japonica Group RepID=Q5SMN1_ORYSJ 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 13-like 1.19859e-37
Putative N-terminus
sp_v2.0_unigene50108 SustainPine v2.0 87
AutoFact: Potassium channel KAT1 n=2 Tax=Oryza sativa RepID=KAT1_ORYSJ 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v2.0_unigene50150 SustainPine v2.0 711
AutoFact: Pinoresinol-lariciresinol reductase n=2 Tax=Thuja plicata RepID=Q9LD12_THUPL 0.0
FL-Next: tr=Pinoresinol-lariciresinol reductase; Thuja plicata (Western red-cedar) (Giant arborvitae). 0.0
Blast2go: phenylcoumaran benzylic ether reductase -like protein 0.0
C-terminus
sp_v2.0_unigene50429 SustainPine v2.0 398
AutoFact: Cyclic nucleotide gated channel n=1 Tax=Malus x domestica RepID=A9CRE4_MALDO 2.0e-37
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 3.36312e-44
Internal
sp_v2.0_unigene50850 SustainPine v2.0 374
AutoFact: Shaker-like potassium channel 1 n=1 Tax=Populus euphratica RepID=D2KPG5_POPEU 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel akt1-like 3.11154e-37
Internal
sp_v2.0_unigene51523 SustainPine v2.0 515
AutoFact: ABC transporter C family member 3 [Arabidopsis thaliana] sp|Q9LK64.1|AB3C_ARATH RecName: Full=ABC transporter C family member 3; Short=ABC transporter ABCC.3; Short=AtABCC3; AltName: Full=ATP-energized glutathione S-conjugate pump 3; AltName: Full=Glutath 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
sp_v2.0_unigene52761 SustainPine v2.0 604
AutoFact: putative cyclic nucleotide and calmodulin-regulated ion channel protein [Hordeum vulgare subsp. vulgare] 1.0e-24
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 5.10271e-30
C-terminus
sp_v2.0_unigene52854 SustainPine v2.0 403
AutoFact: Potassium channel n=2 Tax=Solanum RepID=Q9LEG6_SOLLC 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 1.19532e-29
Internal
sp_v2.0_unigene54549 SustainPine v2.0 236
AutoFact: RecName: Full=Potassium channel KOR2; AltName: Full=K(+) outward-rectifying channel 2 emb|CAD40970.2| OSJNBa0027P08.8 [Oryza sativa Japonica Group] 1.0e-22
FL-Next: Isoform 2 of Potassium channel KOR2 OS=Oryza sativa subsp. japonica GN=Os04g0445000 0.0
Blast2go: shaker-like potassium channel 3.46198e-28
Internal
sp_v2.0_unigene55167 SustainPine v2.0 306
AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9GJX7_POPTR 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance protein abc transporter family 3.82497e-31
Internal
sp_v2.0_unigene58462 SustainPine v2.0 392
AutoFact: putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] dbj|BAD35887.1| putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] 4.0e-33
FL-Next: sp=Putative cyclic nucleotide-gated ion channel 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 2.30093e-42
Internal
sp_v2.0_unigene59199 SustainPine v2.0 245
AutoFact: Inward rectifying shaker-like K+ channel n=4 Tax=Vitis vinifera RepID=D0R6Q1_VITVI 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 4.21728e-31
Internal
sp_v2.0_unigene63765 SustainPine v2.0 498
AutoFact: Inward rectifying potassium channel n=1 Tax=Cucumis melo RepID=Q0R4Q4_CUCME 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inward rectifying potassium channel 2.38292e-19
Internal
sp_v2.0_unigene66499 SustainPine v2.0 357
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_69.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T0J2_VITVI 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel 17-like 0.0
Internal
sp_v2.0_unigene66628 SustainPine v2.0 382
AutoFact: Potassium channel n=2 Tax=Solanum RepID=Q9LEG6_SOLLC 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 6.54445e-25
N-terminus
sp_v2.0_unigene67151 SustainPine v2.0 343
AutoFact: cationic amino acid transporter 3 [Arabidopsis thaliana] dbj|BAC42395.1| putative cationic amino acid transporter [Arabidopsis thaliana] gb|AED94130.1| cationic amino acid transporter 3 [Arabidopsis thaliana] 4.0e-21
FL-Next: tr=Putative uncharacterized protein CAT1-2; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: cationic amino acid transporter 7.36239e-28
Putative C-terminus
sp_v2.0_unigene67932 SustainPine v2.0 305
AutoFact: Potassium channel KAT2, putative n=1 Tax=Ricinus communis RepID=B9S124_RICCO 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 6.94108e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain