Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene20507 SustainPine v2.0 423
AutoFact: ABC transporter B family member 20 n=6 Tax=Arabidopsis RepID=AB20B_ARATH 2.0e-39
FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter b family member 20-like 1.43031e-40
Internal
sp_v2.0_unigene21893 SustainPine v2.0 569
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisomal -2-hydroxy-acid oxidase 2 0.0
C-terminus
sp_v2.0_unigene23176 SustainPine v2.0 2320
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: opc-8:0 ligase1 0.0
Complete
sp_v2.0_unigene23402 SustainPine v2.0 715
AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
C-terminus
sp_v2.0_unigene24580 SustainPine v2.0 804
AutoFact: Polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q8W153_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
N-terminus
sp_v2.0_unigene24987 SustainPine v2.0 2943
AutoFact: O-acetyltransferase-like protein [Arabidopsis thaliana] ref|NP_001031478.1| O-acetyltransferase-like protein [Arabidopsis thaliana] gb|AAU05470.1| At2g34410 [Arabidopsis thaliana] gb|AAV59284.1| At2g34410 [Arabidopsis thaliana] dbj|BAD94920.1| hypothetica 0.0
FL-Next: tr=AT2G34410 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: o-acetyltransferase-like protein 0.0
Complete
sp_v2.0_unigene25768 SustainPine v2.0 314
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
sp_v2.0_unigene26750 SustainPine v2.0 948
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9R9V0_RICCO 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: receptor protein kinase clavata1 0.0
Internal
sp_v2.0_unigene26989 SustainPine v2.0 1222
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
C-terminus
sp_v2.0_unigene27018 SustainPine v2.0 667
AutoFact: [V] COG1132 ABC-type multidrug transport system, ATPase and permease components 2.8026e-45
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 1-like 0.0
Internal
sp_v2.0_unigene27024 SustainPine v2.0 1566
AutoFact: ABC transporter B family member 15 n=3 Tax=Arabidopsis RepID=AB15B_ARATH 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
Internal
sp_v2.0_unigene27684 SustainPine v2.0 1202
AutoFact: subtilisin-like proteinase-like [Oryza sativa Japonica Group] dbj|BAB90087.1| subtilisin-like proteinase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
C-terminus
sp_v2.0_unigene27742 SustainPine v2.0 1762
AutoFact: Putative receptor protein kinase [Oryza sativa Japonica Group] gb|AAP53098.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at3g47570-like 0.0
Putative C-terminus
sp_v2.0_unigene27842 SustainPine v2.0 270
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: reduced epidermal fluorescence 4 protein 1.36486e-41
Internal
sp_v2.0_unigene27898 SustainPine v2.0 1962
AutoFact: Receptor-like protein kinase n=2 Tax=Glycine max RepID=C6ZRW9_SOYBN 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich receptor-like protein kinase bam1 0.0
C-terminus
sp_v2.0_unigene28165 SustainPine v2.0 285
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RF00_SELML 6.0e-31
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: atp-binding cassette transporter 3.06391e-36
Internal
sp_v2.0_unigene28318 SustainPine v2.0 2459
AutoFact: Receptor-like protein kinase n=2 Tax=Glycine max RepID=C6ZRW9_SOYBN 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich receptor-like protein kinase bam1 0.0
C-terminus
sp_v2.0_unigene28490 SustainPine v2.0 1052
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene28530 SustainPine v2.0 2438
AutoFact: putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] sp|Q9ZUI0.1|Y2241_ARATH RecName: Full=Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130; Flags: Precursor gb|AAD03374.1| putative receptor- 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at3g47570-like 0.0
Internal
sp_v2.0_unigene28567 SustainPine v2.0 776
AutoFact: putative 4-coumarate:coenzyme A ligase [Oryza sativa Japonica Group] dbj|BAD82110.1| putative 4-coumarate:coenzyme A ligase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amp dependent 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain