Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene82223 SustainPine v2.0 690
AutoFact: Cytochrome P450 n=1 Tax=Populus trichocarpa RepID=B9GR20_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Internal
sp_v2.0_unigene82532 SustainPine v2.0 719
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calreticulin precursor 0.0
Internal
sp_v2.0_unigene82632 SustainPine v2.0 540
AutoFact: DUF538 multi-domain protein 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100245914 0.0
Complete
sp_v2.0_unigene82672 SustainPine v2.0 754
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R809_RICCO 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myrosinase-binding protein 2.06381e-38
Complete
sp_v2.0_unigene84443 SustainPine v2.0 559
AutoFact: LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] gb|AAU15177.1| At1g76060 [Arabidopsis thaliana] gb|AEE35791.1| LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lyr family of fe s cluster biogenesis protein 0.0
C-terminus
sp_v2.0_unigene84640 SustainPine v2.0 1328
AutoFact: Protein YME1, putative n=1 Tax=Ricinus communis RepID=B9RRQ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh mitochondrial-like 0.0
C-terminus
sp_v2.0_unigene85411 SustainPine v2.0 1016
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v2.0_unigene85437 SustainPine v2.0 317
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S1R1_RICCO 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 3.07974e-36
Internal
sp_v2.0_unigene85701 SustainPine v2.0 1635
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S1R1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 0.0
C-terminus
sp_v2.0_unigene85706 SustainPine v2.0 790
AutoFact: proteinaceous RNase P 1 [Arabidopsis thaliana] sp|Q66GI4.1|PP179_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Flags: Precursor gb|AAU05541.1| At2g32230 [Arabidopsis thaliana] gb|AEC08652.1| proteinaceous RNase 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene85741 SustainPine v2.0 449
AutoFact: CBL-interacting serine/threonine-protein kinase 23 [Arabidopsis thaliana] sp|Q93VD3.1|CIPKN_ARATH RecName: Full=CBL-interacting serine/threonine-protein kinase 23; AltName: Full=Protein LOW-K(+)-SENSITIVE 1; AltName: Full=SNF1-related kinase 3.23; AltName 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine kinase 0.0
Internal
sp_v2.0_unigene85942 SustainPine v2.0 380
AutoFact: alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] emb|CAB41157.1| putative protein [Arabidopsis thaliana] gb|AAL38758.1| unknown protein [Arabidopsis thaliana] gb|AEE78413.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.11858e-39
Putative N-terminus
sp_v2.0_unigene86464 SustainPine v2.0 836
AutoFact: allyl alcohol dehydrogenase [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nadp-dependent alkenal double bond reductase p2 0.0
Internal
sp_v2.0_unigene86472 SustainPine v2.0 595
AutoFact: PLAC8 family protein [Arabidopsis thaliana] gb|AAU44540.1| hypothetical protein AT5G05350 [Arabidopsis thaliana] gb|AED90862.1| PLAC8 family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plac8 family protein 0.0
Internal
sp_v2.0_unigene86512 SustainPine v2.0 559
AutoFact: CBL-interacting protein kinase 07 n=2 Tax=Vitis vinifera RepID=A5BJJ8_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine kinase 0.0
Internal
sp_v2.0_unigene88133 SustainPine v2.0 382
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQ16_RICCO 8.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 8.39618e-32
Internal
sp_v2.0_unigene88814 SustainPine v2.0 344
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at2g27610-like 8.03322e-13
C-terminus
sp_v2.0_unigene90912 SustainPine v2.0 430
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycine-rich protein 0.0
N-terminus
sp_v2.0_unigene90917 SustainPine v2.0 744
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T9P1_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctp:phosphorylcholine cytidylyltransferase 0.0
Internal
sp_v2.0_unigene90980 SustainPine v2.0 432
AutoFact: Ftsh-like protease n=1 Tax=Pisum sativum RepID=Q6A167_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain