Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene8246 SustainPine v2.0 470
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v2.0_unigene8285 SustainPine v2.0 1593
• AutoFact: Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana] gb|AAY34160.1| At1g26520 [Arabidopsis thaliana] gb|AEE30700.1| Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cobw domain-containing protein 1-like 0.0
Complete
sp_v2.0_unigene8295 SustainPine v2.0 2804
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: transducin wd40 domain-containing protein 0.0
Complete
sp_v2.0_unigene8296 SustainPine v2.0 1467
• AutoFact: putative nitrate transporter NRT1-3 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peptide transporter ptr3-a 0.0
C-terminus
sp_v2.0_unigene8321 SustainPine v2.0 1263
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g10910, chloroplastic; Flags: Precursor dbj|BAE98748.1| membrane-associated salt-inducible protein isol 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
sp_v2.0_unigene8335 SustainPine v2.0 1128
• AutoFact: LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] gb|AAU15177.1| At1g76060 [Arabidopsis thaliana] gb|AEE35791.1| LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lyr family of fe s cluster biogenesis protein 0.0
Complete
sp_v2.0_unigene8384 SustainPine v2.0 3407
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v2.0_unigene8411 SustainPine v2.0 1822
• AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene8441 SustainPine v2.0 1233
• AutoFact: ribosomal protein L7/L12 domain-containing protein [Arabidopsis thaliana] ref|NP_001185360.1| ribosomal protein L7/L12 domain-containing protein [Arabidopsis thaliana] gb|AAK25833.1|AF360123_1 unknown protein [Arabidopsis thaliana] gb|AAB61098.1| Similar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein l7 l12 domain-containing protein 0.0
Complete
sp_v2.0_unigene8550 SustainPine v2.0 929
• AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene8555 SustainPine v2.0 1336
• AutoFact: diacylglycerol kinase 3 [Arabidopsis thaliana] gb|AAL57635.1| At2g18730/MSF3.11 [Arabidopsis thaliana] gb|AAM98254.1| At2g18730/MSF3.11 [Arabidopsis thaliana] gb|AEC06799.1| diacylglycerol kinase 3 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: diacylglycerol kinase 0.0
Internal
sp_v2.0_unigene8618 SustainPine v2.0 1043
• AutoFact: Flavonoid 3'5'-hydroxylase n=1 Tax=Phalaenopsis hybrid cultivar RepID=Q3YAF0_9ASPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene8873 SustainPine v2.0 2844
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v2.0_unigene8889 SustainPine v2.0 561
• AutoFact: Putative alpha-amylase n=1 Tax=Ceratopteris richardii RepID=Q0QJL6_CERRI 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha-amylase 0.0
C-terminus
sp_v2.0_unigene8900 SustainPine v2.0 1251
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene8982 SustainPine v2.0 629
• AutoFact: Glucan synthase like 3 n=2 Tax=Selaginella moellendorffii RepID=D8QQF0_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glucan synthase like 3 0.0
N-terminus
sp_v2.0_unigene9100 SustainPine v2.0 733
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF9.1|PP266_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46870 emb|CAB51178.1| putative protein [Arabidopsis thaliana] dbj|BAC42475.1| unknown protein [Arabido 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
N-terminus
sp_v2.0_unigene9392 SustainPine v2.0 867
• AutoFact: metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] gb|AAR24228.1| At1g30300 [Arabidopsis thaliana] gb|AAR92355.1| At1g30300 [Arabidopsis thaliana] gb|AEE31204.1| metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: hydrolase-like protein 0.0
C-terminus
sp_v2.0_unigene9451 SustainPine v2.0 1287
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71060, mitochondrial; Flags: Precursor gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Ar 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
C-terminus
sp_v2.0_unigene9468 SustainPine v2.0 716
• AutoFact: Bidirectional sugar transporter SWEET16 n=2 Tax=Oryza sativa RepID=SWT16_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome c oxidoreductase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain