Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene13686 SustainPine v2.0 3241
• AutoFact: ALG2-interacting protein X [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alg2-interacting protein x 0.0
Complete
sp_v2.0_unigene13784 SustainPine v2.0 587
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene13792 SustainPine v2.0 897
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860 emb|CAB86040.1| putative protein [Arabidopsis thaliana] gb|AED90528.1| pentatricopeptide repeat- 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene13825 SustainPine v2.0 1237
• AutoFact: Putative cytochrome P450 [Oryza sativa Japonica Group] gb|EAY89085.1| hypothetical protein OsI_10573 [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: medium chain fatty acid hydroxylase 0.0
C-terminus
sp_v2.0_unigene13840 SustainPine v2.0 575
• AutoFact: Nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gb|AAM65929.1| unknown [Arabidopsis thaliana] gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gb|AAO63896.1 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bidirectional sugar transporter sweet1-like 2.31915e-41
Putative C-terminus
sp_v2.0_unigene13886 SustainPine v2.0 2753
• AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: callose synthase 0.0
Complete
sp_v2.0_unigene13958 SustainPine v2.0 691
• AutoFact: Pentatricopeptide repeat protein 91 n=3 Tax=Funariaceae RepID=F5CAE1_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at5g66520-like 0.0
Internal
sp_v2.0_unigene13997 SustainPine v2.0 1370
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative Complete
sp_v2.0_unigene14119 SustainPine v2.0 3487
• AutoFact: AMP deaminase [Arabidopsis thaliana] ref|NP_850294.1| AMP deaminase [Arabidopsis thaliana] sp|O80452.2|AMPD_ARATH RecName: Full=AMP deaminase; Short=AtAMPD; AltName: Full=Protein EMBRYONIC FACTOR 1 gb|AAL07150.1| putative AMP deaminase [Arabidopsis thalia 0.0
• FL-Next: sp=AMP deaminase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: amp deaminase 0.0
Complete
sp_v2.0_unigene14207 SustainPine v2.0 390
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475 dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana] gb|AED92568.1| pentatricopeptide rep 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.82972e-38
Internal
sp_v2.0_unigene14257 SustainPine v2.0 247
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.86871e-24
Putative N-terminus
sp_v2.0_unigene14434 SustainPine v2.0 558
• AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 7.00005e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene14483 SustainPine v2.0 1418
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJW1_RICCO 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-binding protein escarola-like 0.0
C-terminus
sp_v2.0_unigene14518 SustainPine v2.0 520
• AutoFact: PPR domain containing protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 7.73783e-41
Internal
sp_v2.0_unigene14538 SustainPine v2.0 838
• AutoFact: DYW8 protein (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q9M4P5_ARATH 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.485e-19
C-terminus
sp_v2.0_unigene14599 SustainPine v2.0 665
• AutoFact: RecName: Full=Cytochrome P450 704C1; AltName: Full=Cytochrome P450 CYPD gb|AAX07434.1| cytochrome P450 CYPD [Pinus taeda] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 0.0
Internal
sp_v2.0_unigene14656 SustainPine v2.0 452
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at4g33990-like 8.77484e-16
C-terminus
sp_v2.0_unigene14695 SustainPine v2.0 573
• AutoFact: GDSL-lipase 1 (Fragment) n=1 Tax=Capsicum annuum RepID=Q0R4F7_CAPAN 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gdsl-motif lipase hydrolase family protein 2.03003e-38
Putative N-terminus
sp_v2.0_unigene14759 SustainPine v2.0 687
• AutoFact: Bipolar kinesin KRP-130, putative n=1 Tax=Ricinus communis RepID=B9T432_RICCO 4.99983e-42
• FL-Next: sp=Probable 125 kDa kinesin-related protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: kinesin family member 11 1.0406e-41
N-terminus
sp_v2.0_unigene14773 SustainPine v2.0 459
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain