Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene12322 SustainPine v2.0 341
• AutoFact: SAP domain containing protein 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.62105e-35
Internal
sp_v2.0_unigene12370 SustainPine v2.0 365
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T4W2_RICCO 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 5.54741e-36
Internal
sp_v2.0_unigene12442 SustainPine v2.0 608
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654 gb|AAM14084.1| putative salt-inducible protein [Ara 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene12464 SustainPine v2.0 394
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RT09_RICCO 2.0e-25
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g50280, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 3.28808e-25
Internal
sp_v2.0_unigene12497 SustainPine v2.0 592
• AutoFact: alpha-amylase [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene12633 SustainPine v2.0 384
• AutoFact: pfam12854, PPR_1, PPR repeat 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.4013e-45
Internal
sp_v2.0_unigene12643 SustainPine v2.0 494
• AutoFact: Unassigned protein
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g04810, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.94502e-32
C-terminus
sp_v2.0_unigene12775 SustainPine v2.0 1692
• AutoFact: MtN3_slv domain containing protein 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bidirectional sugar transporter sweet4-like 0.0
Complete
sp_v2.0_unigene12784 SustainPine v2.0 427
• AutoFact: origin recognition complex subunit 4 [Zea mays] gb|AAL10455.1|AF417484_1 origin recognition complex subunit 4 [Zea mays] 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: origin recognition complex subunit 4 1.43104e-22
Putative N-terminus
sp_v2.0_unigene12820 SustainPine v2.0 383
• AutoFact: pfam01535, PPR, PPR repeat 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.19119e-24
Internal
sp_v2.0_unigene12837 SustainPine v2.0 370
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RKP8_RICCO 8.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 2.10195e-44
Internal
sp_v2.0_unigene12851 SustainPine v2.0 703
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
C-terminus
sp_v2.0_unigene12947 SustainPine v2.0 356
• AutoFact: Seven-transmembrane-domain protein 1 n=2 Tax=Andropogoneae RepID=B6TVH3_MAIZE 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bidirectional sugar transporter sweet1-like 4.316e-42
Internal
sp_v2.0_unigene13007 SustainPine v2.0 412
• AutoFact: pfam01535, PPR, PPR repeat 0.0001
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene13257 SustainPine v2.0 636
• AutoFact: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9RVZ6_RICCO 0.0
• FL-Next: sp=Callose synthase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: glucan synthase component 0.0
Internal
sp_v2.0_unigene13325 SustainPine v2.0 440
• AutoFact: alpha-1,3-mannosyltransferase, putative; K03843 alpha-1,3/alpha-1,6-mannosyltransferase [EC:2.4.1.132 2.4.1.-] 2.0e-36
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: alpha- -mannosyltransferase alg2-like 1.4013e-45
N-terminus
sp_v2.0_unigene13407 SustainPine v2.0 442
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S7Q8_RICCO 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.56438e-43
Internal
sp_v2.0_unigene13419 SustainPine v2.0 559
• AutoFact: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9RVZ6_RICCO 0.0
• FL-Next: sp=Callose synthase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: callose synthase 11-like 0.0
Internal
sp_v2.0_unigene13424 SustainPine v2.0 475
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P0C7R4.1|PP110_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g69290 gb|AEE34906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene13489 SustainPine v2.0 610
• AutoFact: DNA methyl transferase4 [Zea mays] gb|AAK40306.1| DNA methyltransferase ZMET4 [Zea mays] gb|ACF82728.1| unknown [Zea mays] 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna methyltransferase-2 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain