Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA polymerase II, heptapeptide repeat, eukaryotic

Term: IPR000684  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene58274 SustainPine v2.0 289
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] dbj|BAC42504.1| unknown protein [Arabidopsis thaliana] gb|ACN59279.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEE36273.1| leucine-rich repeat protein 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at5g49770-like 4.60879e-38
Internal
sp_v2.0_unigene62563 SustainPine v2.0 407
AutoFact: PREDICTED: similar to cAMP response element-binding protein 5 n=1 Tax=Hydra magnipapillata RepID=UPI0001925AA1 2.0e-07
Blast2go: camp response element-binding protein 5 5.12823e-09
Coding
sp_v2.0_unigene64101 SustainPine v2.0 385
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 1.0e-28
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase 9.81047e-35
Internal
sp_v2.0_unigene64154 SustainPine v2.0 497
AutoFact: receptor protein kinase-like [Oryza sativa Japonica Group] 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.90454e-44
C-terminus
sp_v2.0_unigene66126 SustainPine v2.0 422
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_28.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CTU8_VITVI 2.0e-34
FL-Next: sp=Reticuline oxidase; Eschscholzia californica (California poppy). 0.0
Blast2go: reticuline oxidase-like 5.47908e-41
Internal
sp_v2.0_unigene69554 SustainPine v2.0 406
AutoFact: Carbohydrate oxidase n=1 Tax=Helianthus annuus RepID=Q8SA59_HELAN 1.0e-26
FL-Next: sp=Reticuline oxidase; Papaver somniferum (Opium poppy). 0.0
Blast2go: reticuline oxidase-like 3.80288e-33
Internal
sp_v2.0_unigene77494 SustainPine v2.0 518
AutoFact: PREDICTED: similar to cAMP response element-binding protein 5 n=1 Tax=Hydra magnipapillata RepID=UPI0001925AA1 2.0e-07
Blast2go: camp response element-binding protein 5 1.28271e-08
Coding
sp_v2.0_unigene78635 SustainPine v2.0 525
AutoFact: FAD-linked oxidoreductase 1 n=1 Tax=Glycine max RepID=Q2PMD5_SOYBN 7.0e-39
FL-Next: sp=Reticuline oxidase; Eschscholzia californica (California poppy). 0.0
Blast2go: fad-linked oxidoreductase 0.0
Internal
sp_v2.0_unigene78748 SustainPine v2.0 767
AutoFact: Herpes_BLLF1 multi-domain protein 9.0e-15
Coding
sp_v2.0_unigene85397 SustainPine v2.0 1259
AutoFact: putative calcium/calmodulin-regulated receptor-like kinase [Oryza sativa Japonica Group] dbj|BAB92857.1| putative calcium/calmodulin-regulated receptor-like kinase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene87806 SustainPine v2.0 261
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 2.0e-23
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase 1.18612e-29
Internal
sp_v2.0_unigene88434 SustainPine v2.0 892
AutoFact: Herpes_BLLF1 multi-domain protein 7.0e-24
FL-Next: sp=DNA-directed RNA polymerase; Blastocystis hominis. 0.0
Blast2go: salivary glue protein sgs-4 1.16479e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain