Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene77773 SustainPine v2.0 754
AutoFact: NTF2 domain containing protein 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low quality protein: g3bp-like 0.0
N-terminus
sp_v2.0_unigene77819 SustainPine v2.0 339
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 4.0e-34
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 4.92852e-35
Putative C-terminus
sp_v2.0_unigene77905 SustainPine v2.0 644
AutoFact: Cinnamyl alcohol dehydrogenase n=1 Tax=Elaeis guineensis RepID=B3TLU8_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamyl alcohol dehydrogenase 0.0
N-terminus
sp_v2.0_unigene78035 SustainPine v2.0 235
AutoFact: NAM protein n=1 Tax=Petunia x hybrida RepID=Q40880_PETHY 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein cup-shaped cotyledon 2-like 2.47863e-19
Internal
sp_v2.0_unigene78085 SustainPine v2.0 348
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 8.0e-27
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Blast2go: retrotransposon ty3-gypsy subclass 5.06301e-31
Internal
sp_v2.0_unigene78087 SustainPine v2.0 234
AutoFact: Nucleotid_trans domain containing protein 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein at4g15970-like 4.71474e-39
Internal
sp_v2.0_unigene78156 SustainPine v2.0 305
AutoFact: Reverse transcriptase (RNA-dependent DNA polymerase), putative n=1 Tax=Medicago truncatula RepID=Q1S5J6_MEDTR 2.0e-18
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 7.55313e-22
Internal
sp_v2.0_unigene78324 SustainPine v2.0 402
AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 7.0e-26
FL-Next: tr=Mutant gag-pol polyprotein; Pisum sativum (Garden pea). 0.0
Blast2go: gag-pol polyprotein 1.71882e-32
Putative C-terminus
sp_v2.0_unigene78517 SustainPine v2.0 839
AutoFact: putative dihydroflavonol reductase [Oryza sativa] 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bifunctional dihydroflavonol 4-reductase flavanone 4-reductase-like isoform 2 0.0
Putative N-terminus
sp_v2.0_unigene78924 SustainPine v2.0 404
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q60ET2_ORYSJ 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 0.0
Putative Complete
sp_v2.0_unigene79292 SustainPine v2.0 712
AutoFact: Otubain-like cysteine protease n=2 Tax=Pinaceae RepID=A5YBN2_PINRA 0.0
FL-Next: tr=Otubain-like cysteine protease; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: ubiquitin thioesterase otubain-like protein 0.0
C-terminus
sp_v2.0_unigene79615 SustainPine v2.0 393
AutoFact: oligopeptidase B [Triticum aestivum] 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: oligopeptidase b 1.45607e-33
Putative C-terminus
sp_v2.0_unigene79890 SustainPine v2.0 478
AutoFact: Hsp90-2-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 90 0.0
Putative Complete
sp_v2.0_unigene79911 SustainPine v2.0 631
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 0.0
Internal
sp_v2.0_unigene79921 SustainPine v2.0 572
AutoFact: serine/threonine protein kinase, transcription repression [Chlamydomonas reinhardtii] gb|AAL60199.1|AF443205_1 serine/threonine protein kinase [Chlamydomonas reinhardtii] gb|EDP01578.1| serine/threonine protein kinase, transcription repression [Chlamydomo 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase i isoform alpha 5.14751e-24
C-terminus
sp_v2.0_unigene79966 SustainPine v2.0 598
AutoFact: casein kinase I-like protein [Arabidopsis thaliana] gb|AEC07749.1| casein kinase I-like protein [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase 0.0
C-terminus
sp_v2.0_unigene80413 SustainPine v2.0 461
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PTP5_PICSI 7.0e-21
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 1.06231e-26
Complete
sp_v2.0_unigene80595 SustainPine v2.0 675
AutoFact: Probable ubiquitin-conjugating enzyme E2 n=3 Tax=Picea RepID=O65079_PICMA 2.0e-20
FL-Next: tr=Probable ubiquitin-conjugating enzyme E2; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 34 4.8807e-24
N-terminus
sp_v2.0_unigene80702 SustainPine v2.0 810
AutoFact: pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene81000 SustainPine v2.0 388
AutoFact: vesicle-associated membrane protein 721 [Arabidopsis thaliana] dbj|BAD44122.1| putative vesicle-associated membrane protein, synaptobrevin 7B [Arabidopsis thaliana] gb|AEE27739.1| vesicle-associated membrane protein 721 [Arabidopsis thaliana] 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane protein 725 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain