Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene68267 SustainPine v2.0 300
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y0A9_ORYSJ 3.0e-17
FL-Next: tr=Putative retroelement; Oryza sativa (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 1.66354e-20
Internal
sp_v2.0_unigene68297 SustainPine v2.0 340
AutoFact: Detoxifying efflux carrier 35 n=5 Tax=Arabidopsis RepID=F4JTB2_ARATH 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: detoxifying efflux carrier 35 9.09795e-26
C-terminus
sp_v2.0_unigene68458 SustainPine v2.0 511
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane 2.8026e-45
N-terminus
sp_v2.0_unigene68586 SustainPine v2.0 340
AutoFact: Callose synthase 5 n=5 Tax=Arabidopsis RepID=CALS5_ARATH 7.0e-34
FL-Next: sp=Callose synthase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 1.07292e-39
Internal
sp_v2.0_unigene68637 SustainPine v2.0 237
AutoFact: Exocyst subunit exo70 family protein A1 n=4 Tax=Brassicaceae RepID=Q9LZD3_ARATH 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exocyst subunit exo70 family protein a1 4.3142e-34
Internal
sp_v2.0_unigene68725 SustainPine v2.0 458
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene68769 SustainPine v2.0 411
AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE 2.0e-21
FL-Next: tr=Putative gag-pol polyprotein, identical; Solanum demissum (Wild potato). 0.0
Blast2go: uncharacterized protein partial 3.32395e-21
Internal
sp_v2.0_unigene68968 SustainPine v2.0 417
AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=2 Tax=Oryza sativa Japonica Group RepID=Q53KQ8_ORYSJ 4.0e-22
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy sub-class; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 2.93551e-25
Internal
sp_v2.0_unigene69007 SustainPine v2.0 477
AutoFact: putative lectin-like protein kinase [Oryza sativa Japonica Group] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 1.28404e-28
Internal
sp_v2.0_unigene69011 SustainPine v2.0 469
AutoFact: NXRV091_F10_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV091_F10 5' similar to Arabidopsis thaliana sequence At1g37060 Athila retroelment ORF 1, putative see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100855032 5.88545e-44
Putative C-terminus
sp_v2.0_unigene69110 SustainPine v2.0 644
AutoFact: Lectin-like receptor kinase 7;3 n=1 Tax=Medicago truncatula RepID=Q6UY58_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Putative C-terminus
sp_v2.0_unigene69253 SustainPine v2.0 336
AutoFact: reverse transcriptase [Ginkgo biloba] 8.0e-35
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 8.40779e-45
Putative C-terminus
sp_v2.0_unigene69255 SustainPine v2.0 263
AutoFact: RVT_1 domain containing protein 4.0e-05
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 2.98382e-23
Putative C-terminus
sp_v2.0_unigene69437 SustainPine v2.0 270
AutoFact: putative GTP-binding protein [Oryza sativa Japonica Group] gb|ABF98531.1| Dynamin-related protein 1C, putative, expressed [Oryza sativa Japonica Group] dbj|BAH01687.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC76063.1| hypothetical prote 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.00771e-43
Internal
sp_v2.0_unigene69532 SustainPine v2.0 469
AutoFact: Exostosin-like n=3 Tax=Zea mays RepID=B6SNQ6_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exostosin family protein 0.0
Internal
sp_v2.0_unigene69648 SustainPine v2.0 656
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.61382e-15
Internal
sp_v2.0_unigene69856 SustainPine v2.0 391
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 1.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100854181 1.83806e-38
Putative N-terminus
sp_v2.0_unigene70670 SustainPine v2.0 306
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=8 Tax=Oryza sativa RepID=Q2QR60_ORYSJ 3.0e-21
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 8.57647e-25
Internal
sp_v2.0_unigene70851 SustainPine v2.0 163
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVL5_9POAL 7.0e-10
FL-Next: tr=OSJNBa0014F04.5 protein; Oryza sativa (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 2.2056e-12
Internal
sp_v2.0_unigene70920 SustainPine v2.0 272
AutoFact: AB021952 Oryza sativa ms-bo-Taichung 65 immature anther Oryza sativa Japonica Group cDNA clone DD9R3-1-1, mRNA sequence. 1.0e-20
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: gag-pol polyprotein 4.20225e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain