Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene878 SustainPine v2.0 2020
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 0.0
Complete
sp_v2.0_unigene925 SustainPine v2.0 1306
AutoFact: WS02760.CR_M13 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02760_M13 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein kiaa0664 homolog 0.0
Internal
sp_v2.0_unigene980 SustainPine v2.0 4203
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene1033 SustainPine v2.0 2130
AutoFact: putative polyamine oxidase precursor [Oryza sativa Japonica Group] dbj|BAD25971.1| putative polyamine oxidase precursor [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Polyamine oxidase; Zea mays (Maize). 0.0
Blast2go: polyamine oxidase 0.0
Complete
sp_v2.0_unigene1080 SustainPine v2.0 1573
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
C-terminus
sp_v2.0_unigene1159 SustainPine v2.0 1303
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Pumilio homolog 23 OS=Arabidopsis thaliana GN=APUM23 0.0
Blast2go: pumilio 23 0.0
Internal
sp_v2.0_unigene1246 SustainPine v2.0 1970
AutoFact: Eukaryotic release factor 1 (ERF1) family protein n=2 Tax=Arabidopsis RepID=Q9ZT87_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: eukaryotic release factor 1 family protein 0.0
Complete
sp_v2.0_unigene1298 SustainPine v2.0 2537
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-arginine methyltransferase carm1 0.0
Complete
sp_v2.0_unigene1316 SustainPine v2.0 3116
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
C-terminus
sp_v2.0_unigene1430 SustainPine v2.0 1364
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0
Internal
sp_v2.0_unigene1504 SustainPine v2.0 6467
AutoFact: putative leucine rich repeat protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v2.0_unigene1525 SustainPine v2.0 1027
AutoFact: Nuclear transport receptor exportin 4 (importin beta superfamily) (ISS) [Ostreococcus tauri] emb|CAL57664.1| Nuclear transport receptor exportin 4 (importin beta superfamily) (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene1580 SustainPine v2.0 933
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kelch repeat-containing protein 1.51032e-41
Putative C-terminus
sp_v2.0_unigene1716 SustainPine v2.0 1838
AutoFact: Vacuolar protein sorting factor 4B-like n=4 Tax=Poaceae RepID=Q5QMP6_ORYSJ 0.0
FL-Next: tr=Katanin p60 ATPase-containing subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: katanin p60 atpase-containing subunit a-like 2-like 0.0
Complete
sp_v2.0_unigene1731 SustainPine v2.0 1190
AutoFact: DUF620 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene1737 SustainPine v2.0 2296
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Putative Complete
sp_v2.0_unigene1740 SustainPine v2.0 2728
AutoFact: myosin XI [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: myosin-h heavy chain-like 0.0
C-terminus
sp_v2.0_unigene1765 SustainPine v2.0 2021
AutoFact: glycerol-3-phosphate acyltransferase [Arabidopsis thaliana] sp|Q9LMM0.1|GPAT4_ARATH RecName: Full=Glycerol-3-phosphate acyltransferase 4; Short=AtGPAT4 gb|AAF81319.1|AC061957_15 Contains similarity to a hypothetical protein F16M14.4 gi|7485589 from Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: er glycerol-phosphate acyltransferase 0.0
Complete
sp_v2.0_unigene1838 SustainPine v2.0 1354
AutoFact: WS02744.CR_G13 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02744_G13 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
sp_v2.0_unigene1841 SustainPine v2.0 2275
AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AAD46034.1|AC007519_19 F16N3.20 [Arabidopsis thaliana] gb|AEE32181.1| MATE efflux family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain