Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene81968 SustainPine v2.0 1101
AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 2.8026e-45
FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: glucosyl transferase 7.00649e-45
C-terminus
sp_v2.0_unigene82106 SustainPine v2.0 437
AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 7.0e-26
FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-domain transcription factor 6.94805e-32
N-terminus
sp_v2.0_unigene84963 SustainPine v2.0 563
AutoFact: Ras-related protein RABC1 n=2 Tax=Arabidopsis RepID=RABC1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 0.0
Putative C-terminus
sp_v2.0_unigene85166 SustainPine v2.0 440
AutoFact: Truncated MADS-box transcription factor (Fragment) n=3 Tax=Pinaceae RepID=C6F9J9_PSEMZ 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: truncated mads-box transcription factor 2.16126e-39
N-terminus
sp_v2.0_unigene85955 SustainPine v2.0 217
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 3.0e-20
FL-Next: tr=Putative MADS box transcription factor PrMADS8; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 8 3.51422e-30
Internal
sp_v2.0_unigene86193 SustainPine v2.0 901
AutoFact: Nucleotide-sugar transporter family protein [Arabidopsis thaliana] ref|NP_001031992.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gb|AAM60900.1| CMP-sialic acid transporter-like protein [Arabidopsis thaliana] gb|AAO42302.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide-sugar transporter family protein 0.0
Putative C-terminus
sp_v2.0_unigene86262 SustainPine v2.0 579
AutoFact: Putative MADS box transcription factor PrMADS4 n=1 Tax=Pinus radiata RepID=O24488_PINRA 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 4 5.08921e-35
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain