Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene61489 SustainPine v2.0 969
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
Putative Complete
sp_v2.0_unigene62142 SustainPine v2.0 308
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB62313.1| putative protein [Arabidopsis thaliana] gb|AAO42875.1| At3g50340 [Arabidopsis thaliana] dbj|BAE99549.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78655.1| uncharacterized protein [Arab 3.0e-27
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 1.54887e-38
Internal
sp_v2.0_unigene62222 SustainPine v2.0 460
AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-domain transcription factor dal3 variant 2 0.0
C-terminus
sp_v2.0_unigene62497 SustainPine v2.0 827
AutoFact: MADS-box transcription factor n=3 Tax=Picea abies RepID=Q9SED8_PICAB 0.0
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: b-class mads-box transcription factor 0.0
C-terminus
sp_v2.0_unigene63069 SustainPine v2.0 488
AutoFact: putative MADS box transcription factor PrMADS9 [Pinus radiata] 1.0e-25
FL-Next: tr=DAL3 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: agamous-like mads box protein expressed 1.61871e-31
Putative N-terminus
sp_v2.0_unigene64982 SustainPine v2.0 705
AutoFact: Putative MADS box transcription factor PrMADS4 n=1 Tax=Pinus radiata RepID=O24488_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS4; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 4 0.0
Putative N-terminus
sp_v2.0_unigene65065 SustainPine v2.0 515
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM41_MARPO 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase rkf3-like 0.0
Internal
sp_v2.0_unigene65096 SustainPine v2.0 375
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RPN0_SELML 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 1.66201e-28
Putative N-terminus
sp_v2.0_unigene67772 SustainPine v2.0 976
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: suppressor of overexpression of constans 1-like protein 0.0
Complete
sp_v2.0_unigene68566 SustainPine v2.0 355
AutoFact: MADS-box transcription factor n=2 Tax=Picea abies RepID=Q9SEE0_PICAB 4.0e-16
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: b-class mads-box protein pi 1.24212e-19
N-terminus
sp_v2.0_unigene69634 SustainPine v2.0 382
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: agamous-like mads box protein expressed 8.34554e-28
N-terminus
sp_v2.0_unigene69701 SustainPine v2.0 443
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 2.0e-27
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 6 3.02842e-27
C-terminus
sp_v2.0_unigene74653 SustainPine v2.0 597
AutoFact: receptor protein kinase PERK1-like protein [Oryza sativa Japonica Group] 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase rkf3-like 5.28068e-32
Internal
sp_v2.0_unigene77898 SustainPine v2.0 390
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RPN0_SELML 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 1.022e-27
Putative N-terminus
sp_v2.0_unigene78203 SustainPine v2.0 240
AutoFact: RAB GTPase-C2A [Arabidopsis thaliana] ref|XP_002873100.1| predicted protein [Arabidopsis lyrata subsp. lyrata] sp|O49841.1|RAC2A_ARATH RecName: Full=Ras-related protein RABC2a; Short=AtRABC2a; AltName: Full=Ras-related protein Rab18B; Short=AtRab18B dbj|B 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rabc2a-like 3.06884e-43
Internal
sp_v2.0_unigene78969 SustainPine v2.0 678
AutoFact: MADS-box transcription factor n=3 Tax=Picea abies RepID=Q9SED8_PICAB 0.0
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: b-class mads-box transcription factor 0.0
Putative Complete
sp_v2.0_unigene79376 SustainPine v2.0 293
AutoFact: MADS-box transcription factor n=3 Tax=Picea abies RepID=Q9SED8_PICAB 8.0e-14
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: af158543_1mads-box transcription factor 5.35969e-16
Internal
sp_v2.0_unigene80890 SustainPine v2.0 692
AutoFact: DUF538 domain containing protein 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit a 0.0
C-terminus
sp_v2.0_unigene81324 SustainPine v2.0 482
AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 2.0e-18
FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: af120097_1def glo-like protein 4.07704e-22
Internal
sp_v2.0_unigene81598 SustainPine v2.0 416
AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 2.0e-33
FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: pi glo-like protein 3.39074e-33
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain