Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene35022 SustainPine v2.0 470
AutoFact: MADS-box transcription factor n=2 Tax=Picea abies RepID=Q9SEE2_PICAB 2.0e-34
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: AF158539_1MADS-box transcription factor 7.65109e-43
C-terminus
sp_v2.0_unigene35185 SustainPine v2.0 1111
AutoFact: serine hydroxymethyltransferase 7 [Arabidopsis thaliana] gb|AAO22567.1| putative hydroxymethyltransferase [Arabidopsis thaliana] gb|AEE31862.1| serine hydroxymethyltransferase 7 [Arabidopsis thaliana] 1.0e-33
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 6.39327e-39
N-terminus
sp_v2.0_unigene35716 SustainPine v2.0 475
AutoFact: AGL15 n=1 Tax=Glycine max RepID=Q67BK3_SOYBN 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: agl11 5.91526e-19
N-terminus
sp_v2.0_unigene36174 SustainPine v2.0 881
AutoFact: putative receptor ser/thr protein [Oryza sativa Japonica Group] gb|ABF95119.1| Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat family protein protein kinase family protein 0.0
N-terminus
sp_v2.0_unigene36342 SustainPine v2.0 288
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box protein jointless 1.07441e-15
Internal
sp_v2.0_unigene36642 SustainPine v2.0 779
AutoFact: putative MADS-box family transcription factor [Pinus radiata] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box protein 0.0
Complete
sp_v2.0_unigene39825 SustainPine v2.0 377
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box protein jointless 1.80394e-23
Putative N-terminus
sp_v2.0_unigene40109 SustainPine v2.0 268
AutoFact: Isoform 2 of MADS-box transcription factor 13 n=1 Tax=Oryza sativa Japonica Group RepID=Q2QW53-2 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: floral homeotic protein expressed 1.6147e-18
Internal
sp_v2.0_unigene40237 SustainPine v2.0 517
AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 1.0e-33
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box transcription factor 1.74055e-41
N-terminus
sp_v2.0_unigene42780 SustainPine v2.0 347
AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 1.00053e-42
FL-Next: tr=B-class MADS-box transcription factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Blast2go: b-class mads-box transcription factor 0.0
Internal
sp_v2.0_unigene45985 SustainPine v2.0 538
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 3.92364e-44
Putative N-terminus
sp_v2.0_unigene48642 SustainPine v2.0 494
AutoFact: putative MADS domain transcription factor GGM7 [Gnetum gnemon] 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads domain transcription factor ggm7 8.62583e-20
Putative N-terminus
sp_v2.0_unigene49221 SustainPine v2.0 316
AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 5.0e-26
FL-Next: tr=B-class MADS-box transcription factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Blast2go: b-sister lineage-like protein bs 1.37049e-32
C-terminus
sp_v2.0_unigene55028 SustainPine v2.0 302
AutoFact: Protein kinase n=4 Tax=Andropogoneae RepID=B6SY15_MAIZE 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at1g11050-like 0.0
Internal
sp_v2.0_unigene56036 SustainPine v2.0 395
AutoFact: Transcription factor n=1 Tax=Ceratopteris richardii RepID=O65801_CERRI 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mikcc mads-domain protein -s 1.96182e-44
N-terminus
sp_v2.0_unigene57554 SustainPine v2.0 491
AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 2.0e-25
FL-Next: tr=MADS3 protein; Thujopsis dolabrata (Hiba arborvitae) (Platycladus dolabrata). 0.0
Blast2go: mads-box transcription factor bm5a 6.47664e-31
N-terminus
sp_v2.0_unigene57705 SustainPine v2.0 345
AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 7.0e-31
FL-Next: tr=Putative MADS-box family transcription factor; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-domain transcription factor 9.25059e-39
Internal
sp_v2.0_unigene59961 SustainPine v2.0 904
AutoFact: [K] COG5068 Regulator of arginine metabolism and related MADS box-containing transcription factors 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
Complete
sp_v2.0_unigene60072 SustainPine v2.0 909
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 6 0.0
Complete
sp_v2.0_unigene61094 SustainPine v2.0 832
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: soc1-like protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain