Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene28262 SustainPine v2.0 871
AutoFact: putative MADS-domain transcription factor DEFH7 [Antirrhinum majus] 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box protein 0.0
Complete
sp_v2.0_unigene28582 SustainPine v2.0 553
AutoFact: putative MADS-box protein [Cucumis sativus] 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mikcc mads-domain protein -s 2.92316e-39
N-terminus
sp_v2.0_unigene28608 SustainPine v2.0 1138
AutoFact: MADS-box transcription factor n=6 Tax=Triticeae RepID=A4UXS0_WHEAT 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box transcription factor 0.0
Complete
sp_v2.0_unigene28623 SustainPine v2.0 517
AutoFact: Truncated MADS-box transcription factor (Fragment) n=3 Tax=Pinaceae RepID=C6F9J9_PSEMZ 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: truncated mads-box transcription factor 5.60606e-39
N-terminus
sp_v2.0_unigene28986 SustainPine v2.0 461
AutoFact: MADS-box transcription factor GbMADS3 [Ginkgo biloba] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dal3 protein 0.0
Internal
sp_v2.0_unigene29003 SustainPine v2.0 964
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
Complete
sp_v2.0_unigene29499 SustainPine v2.0 1139
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 9 0.0
Complete
sp_v2.0_unigene29526 SustainPine v2.0 790
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
Complete
sp_v2.0_unigene30310 SustainPine v2.0 558
AutoFact: MADS-box protein TM3 subfamily (Fragment) n=1 Tax=Coffea arabica RepID=E9JTV7_COFAR 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 4.3218e-14
C-terminus
sp_v2.0_unigene30846 SustainPine v2.0 383
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.70773e-08
Putative C-terminus
sp_v2.0_unigene32089 SustainPine v2.0 933
AutoFact: peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana] gb|AAS47614.1| At1g53530 [Arabidopsis thaliana] gb|AAS76728.1| At1g53530 [Arabidopsis thaliana] dbj|BAF01030.1| hypothetical protein [Arabidopsis thaliana] gb|AEE32952.1| peptidase-S24/S26 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial inner membrane protease subunit 1 0.0
Putative Complete
sp_v2.0_unigene32154 SustainPine v2.0 370
AutoFact: MADS-box transcription factor n=2 Tax=Picea abies RepID=Q9SEE2_PICAB 4.0e-22
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: truncated mads-box transcription factor 1.99201e-27
N-terminus
sp_v2.0_unigene32419 SustainPine v2.0 904
AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-domain transcription factor dal3 variant 2 0.0
Putative Complete
sp_v2.0_unigene32988 SustainPine v2.0 894
AutoFact: Putative MADS domain transcription factor GGM1 n=1 Tax=Gnetum gnemon RepID=Q9XGK6_GNEGN 4.0e-21
FL-Next: tr=Transcription factor, MADS-box; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: agamous-like mads box protein expressed 5.90636e-27
Complete
sp_v2.0_unigene33245 SustainPine v2.0 888
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 0.0
FL-Next: tr=Putative MADS domain transcription factor GGM10; Gnetum gnemon (Bago) (Gnetum acutatum). 0.0
Blast2go: seedstick-like protein 0.0
Complete
sp_v2.0_unigene33274 SustainPine v2.0 779
AutoFact: MADS-box transcription factor GbMADS5 n=1 Tax=Ginkgo biloba RepID=Q58A78_GINBI 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: agl11 4.39753e-20
N-terminus
sp_v2.0_unigene34275 SustainPine v2.0 421
AutoFact: K-box domain containing protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.08014e-10
C-terminus
sp_v2.0_unigene34301 SustainPine v2.0 209
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.85809e-18
Putative C-terminus
sp_v2.0_unigene34788 SustainPine v2.0 328
AutoFact: K-box domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.11879e-25
C-terminus
sp_v2.0_unigene34983 SustainPine v2.0 468
AutoFact: MIKCC MADS-domain protein PPMC6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TDM3_PHYPA 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mikcc mads-domain protein ppmc6 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain