Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, SWIM-type

Term: IPR007527  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene33259 SustainPine v2.0 653
AutoFact: DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9RRL8_RICCO 0.0
FL-Next: sp=DNA topoisomerase; Vitis vinifera (Grape). 0.0
Blast2go: dna topoisomerase iii beta 0.0
Internal
sp_v2.0_unigene33945 SustainPine v2.0 1125
AutoFact: rve domain containing protein 3.0e-26
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: hypothetical protein VITISV_040269 [Vitis vinifera] 0.0
Complete
sp_v2.0_unigene34650 SustainPine v2.0 629
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 6.57481e-16
C-terminus
sp_v2.0_unigene34751 SustainPine v2.0 552
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.94273e-44
Internal
sp_v2.0_unigene34932 SustainPine v2.0 381
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger swim domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene35583 SustainPine v2.0 429
AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAD94053.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01838.1| hypothetical protein [Arabidopsis thaliana] gb|AED91551.1| MSCS-like 2 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mscs-like 2 protein 0.0
Internal
sp_v2.0_unigene35979 SustainPine v2.0 830
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] dbj|BAB02197.1| unnamed protein product [Arabidopsis thaliana] dbj|BAE98825.1| hypothetical protein [Arabidopsis thaliana] gb|AEE77150.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Internal
sp_v2.0_unigene37134 SustainPine v2.0 354
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] emb|CAB69838.1| putative protein [Arabidopsis thaliana] gb|ACI49772.1| At5g01100 [Arabidopsis thaliana] gb|AED90299.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.53635e-43
Internal
sp_v2.0_unigene38675 SustainPine v2.0 573
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene39130 SustainPine v2.0 428
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_027006 [Vitis vinifera] 2.19928e-24
Internal
sp_v2.0_unigene39640 SustainPine v2.0 676
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAM26669.1| AT4g16650/dl4350w [Arabidopsis thaliana] gb|AAN18192.1| At4g16650/dl4350w [Arabidopsis thaliana] dbj|BAD43586.1| growth regulator like protein [Arabidopsis thaliana] gb|AEE83780.1| 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Internal
sp_v2.0_unigene41669 SustainPine v2.0 228
AutoFact: OSJNBa0086O06.3 protein n=2 Tax=Oryza sativa RepID=Q7XM06_ORYSJ 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 8.01156e-20
Internal
sp_v2.0_unigene41947 SustainPine v2.0 421
AutoFact: Barwin-related endoglucanase n=1 Tax=Medicago truncatula RepID=Q2HRD8_MEDTR 6.99949e-42
FL-Next: sp=Putative ripening-related protein 2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ripening-related protein 0.0
Internal
sp_v2.0_unigene42414 SustainPine v2.0 560
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.18061e-35
Putative C-terminus
sp_v2.0_unigene42688 SustainPine v2.0 231
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding protein 2.73129e-24
Putative C-terminus
sp_v2.0_unigene42712 SustainPine v2.0 484
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 4.2039e-45
Internal
sp_v2.0_unigene44939 SustainPine v2.0 446
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100245761 3.74817e-20
N-terminus
sp_v2.0_unigene45597 SustainPine v2.0 679
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 1.47575e-36
Internal
sp_v2.0_unigene46139 SustainPine v2.0 547
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100777486 2.94034e-41
Internal
sp_v2.0_unigene46736 SustainPine v2.0 457
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 3.78351e-44
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain