Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, SWIM-type

Term: IPR007527  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene19808 SustainPine v2.0 321
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana] 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc ion binding protein 7.00379e-17
Internal
sp_v2.0_unigene20777 SustainPine v2.0 897
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v2.0_unigene22806 SustainPine v2.0 798
AutoFact: plastid fibrillin 3 [Coffea canephora] 0.0
FL-Next: sp=Probable plastid-lipid-associated protein 4, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable plastid-lipid-associated protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene23216 SustainPine v2.0 1143
AutoFact: Structural molecule, putative n=1 Tax=Ricinus communis RepID=B9SRI7_RICCO 0.0
FL-Next: sp=Probable plastid-lipid-associated protein 4, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable plastid-lipid-associated protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene25913 SustainPine v2.0 1067
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana] 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding protein 4.52091e-32
Internal
sp_v2.0_unigene26987 SustainPine v2.0 927
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100854191 0.0
Putative Complete
sp_v2.0_unigene27165 SustainPine v2.0 617
AutoFact: Bidirectional sugar transporter SWEET1 n=2 Tax=Arabidopsis RepID=SWET1_ARATH 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene27731 SustainPine v2.0 2648
AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAH20174.1| AT5G10490 [Arabidopsis thaliana] gb|AED91552.1| MSCS-like 2 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mscs-like 2 protein 0.0
Putative Complete
sp_v2.0_unigene27755 SustainPine v2.0 674
AutoFact: SWIM zinc finger-like protein [Arabidopsis thaliana] gb|AAL91647.1| At1g60560/F8A5_10 [Arabidopsis thaliana] gb|AAO11540.1| At1g60560/F8A5_10 [Arabidopsis thaliana] gb|AEE33698.1| SWIM zinc finger-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: swim zinc finger-like protein 0.0
Internal
sp_v2.0_unigene27890 SustainPine v2.0 1174
AutoFact: Nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gb|AAM65929.1| unknown [Arabidopsis thaliana] gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gb|AAO63896.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bidirectional sugar transporter sweet1-like 0.0
Putative Complete
sp_v2.0_unigene28034 SustainPine v2.0 2044
AutoFact: UDP-glucose dehydrogenase n=3 Tax=Oryza sativa RepID=Q75GS4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: udp-glucose dehydrogenase 0.0
Complete
sp_v2.0_unigene28970 SustainPine v2.0 417
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon gag protein 1.13055e-34
Internal
sp_v2.0_unigene29763 SustainPine v2.0 1111
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
sp_v2.0_unigene29888 SustainPine v2.0 1410
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding protein 9.78607e-28
Putative Complete
sp_v2.0_unigene30652 SustainPine v2.0 243
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger swim domain-containing protein 6.86484e-17
C-terminus
sp_v2.0_unigene30995 SustainPine v2.0 317
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 2.0e-25
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon gag protein 1.39486e-29
Putative N-terminus
sp_v2.0_unigene32175 SustainPine v2.0 413
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical retrotransposon 0.0
Internal
sp_v2.0_unigene32212 SustainPine v2.0 559
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_024821 [Vitis vinifera] 4.70836e-43
Putative Complete
sp_v2.0_unigene32302 SustainPine v2.0 341
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty1-copia subclass 3.41527e-26
Internal
sp_v2.0_unigene32592 SustainPine v2.0 692
AutoFact: rve domain containing protein 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_024821 [Vitis vinifera] 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain