Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Retrotransposon gag protein

Term: IPR005162  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene83695 SustainPine v2.0 645
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon ty1-copia subclass 0.0
Internal
sp_v2.0_unigene84422 SustainPine v2.0 2023
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: receptor-like protein kinase hsl1-like 0.0
C-terminus
sp_v2.0_unigene84581 SustainPine v2.0 204
AutoFact: putative retroelement pol polyprotein [Arabidopsis thaliana] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon expressed 1.26845e-21
Internal
sp_v2.0_unigene85773 SustainPine v2.0 386
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.08334e-30
Putative Complete
sp_v2.0_unigene85835 SustainPine v2.0 575
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Lotus japonicus. 0.0
Blast2go: ac051624_3 retroelement 8.81551e-35
Internal
sp_v2.0_unigene85973 SustainPine v2.0 516
AutoFact: Exportin n=1 Tax=Cucumis melo subsp. melo RepID=E5GCF5_CUCME 1.99965e-42
FL-Next: tr=Exportin; Cucumis melo subsp. melo. 0.0
Blast2go: exportin-1-like isoform 2 0.0
Putative N-terminus
sp_v2.0_unigene90196 SustainPine v2.0 514
AutoFact: Cytochrome P450 monooxygenase CYP736B n=3 Tax=Vitis RepID=C0KLZ0_9ROSI 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 monooxygenase cyp736b 0.0
C-terminus
sp_v2.0_unigene91506 SustainPine v2.0 492
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at3g47570-like 0.0
Internal
sp_v2.0_unigene91971 SustainPine v2.0 396
AutoFact: Cationic amino acid transporter n=2 Tax=Populus RepID=B9GYF7_POPTR 1.0e-38
FL-Next: tr=Cationic amino acid transporter; subsp. trichocarpa). 0.0
Blast2go: cationic amino acid transporter 1.4013e-45
Internal
sp_v2.0_unigene92057 SustainPine v2.0 536
AutoFact: [Q] COG2124 Cytochrome P450 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Internal
sp_v2.0_unigene92414 SustainPine v2.0 359
AutoFact: Ferritin (Fragment) n=7 Tax=Pinus RepID=Q06ZR8_PINTH 3.0e-20
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 6.56087e-27
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain