Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Retrotransposon gag protein

Term: IPR005162  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene5622 SustainPine v2.0 567
AutoFact: Chromo domain containing protein 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_014148 [Vitis vinifera] 3.14713e-23
C-terminus
sp_v2.0_unigene6707 SustainPine v2.0 1548
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: cll1b clavata1-like receptor s t protein kinase protein 0.0
C-terminus
sp_v2.0_unigene6911 SustainPine v2.0 2169
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit a-9-like 0.0
Complete
sp_v2.0_unigene7164 SustainPine v2.0 705
AutoFact: FK506-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R9N7_RICCO 0.0
FL-Next: sp=FK506-binding protein 2; Vicia faba (Broad bean) (Faba vulgaris). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene7809 SustainPine v2.0 722
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_89.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SMT7_VITVI 7.00005e-41
FL-Next: sp=Reticuline oxidase; Eschscholzia californica (California poppy). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene8067 SustainPine v2.0 1630
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v2.0_unigene8077 SustainPine v2.0 1537
AutoFact: Amino acid transport protein AAT1 n=3 Tax=Arabidopsis RepID=Q84MA5_ARATH 0.0
FL-Next: tr=Amino acid transport protein AAT1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cationic amino acid transporter 0.0
C-terminus
sp_v2.0_unigene8123 SustainPine v2.0 669
AutoFact: gag/pol polyprotein [Pisum sativum] 9.99995e-41
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100797050 0.0
Putative Complete
sp_v2.0_unigene8299 SustainPine v2.0 1187
AutoFact: oligoribonuclease [Arabidopsis thaliana] dbj|BAH19818.1| AT2G26970 [Arabidopsis thaliana] gb|AEC07913.1| oligoribonuclease [Arabidopsis thaliana] 0.0
FL-Next: sp=Oligoribonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: oligoribonuclease 0.0
Complete
sp_v2.0_unigene8326 SustainPine v2.0 1231
AutoFact: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9SA61_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exostosin family protein 0.0
Putative C-terminus
sp_v2.0_unigene8620 SustainPine v2.0 1062
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
sp_v2.0_unigene9059 SustainPine v2.0 2746
AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S1J0_RICCO 0.0
FL-Next: tr=Lipid binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: enhanced disease resistance 2 protein 0.0
Complete
sp_v2.0_unigene9207 SustainPine v2.0 478
AutoFact: Amino acid transport protein AAT1 n=3 Tax=Arabidopsis RepID=Q84MA5_ARATH 0.0
FL-Next: tr=Amino acid transport protein AAT1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cationic amino acid 0.0
Internal
sp_v2.0_unigene9783 SustainPine v2.0 1775
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: receptor-like protein kinase 0.0
N-terminus
sp_v2.0_unigene9789 SustainPine v2.0 971
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative Complete
sp_v2.0_unigene10280 SustainPine v2.0 821
AutoFact: putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.46629e-43
C-terminus
sp_v2.0_unigene10657 SustainPine v2.0 1251
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SNW7_RICCO 0.0
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein kinase domain-containing protein 0.0
Internal
sp_v2.0_unigene10747 SustainPine v2.0 2085
AutoFact: vesicle-associated membrane protein-associated protein [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane 0.0
Complete
sp_v2.0_unigene10847 SustainPine v2.0 1112
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
sp_v2.0_unigene11242 SustainPine v2.0 762
AutoFact: putative Mlo (pathogen resistance) protein [Oryza sativa Japonica Group] gb|EEE51332.1| hypothetical protein OsJ_32315 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mlo protein homolog 1-like 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain